Chondrinema litorale: OQ292_20820
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Entry
OQ292_20820 CDS
T09098
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_20820
Transporters [BR:
clit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OQ292_20820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_19
Motif
Other DBs
NCBI-ProteinID:
UZR96594
LinkDB
All DBs
Position
unnamed2:109544..111217
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AA seq
557 aa
AA seq
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MNYRKLYIYLIAVLSVLASCSDDILDTKPLDGYSEIDVFADEALLRNYVNGTYRGFRHPF
DNENSLTDGLTDNAFNQHGSAEGTIKTYTRAEVNPSNGEGITRSLWATAYAYIRRTNVYF
EGTVDSQINEEALSVMDGEMRFIRAFLYFDLLRWYGGVPLITTTFELDDENMAVSRNSSE
EIASFIVEECDLAIEELLSVADGDYELGRASIEAAMALKARTLLYIASPLYNEEGDMSRW
QAASDANQAVMELSTVSLVQAADNPNAYGELFTADFTEEAIFSRYFTEVNNQGYGVNTWL
FPNSNGGWANTTPSQDLVDSYELTNGNLPSNPESGYDDQDPYVNRDPRFYQTILYNGAPF
KDAEYEYFLDINDPTNSALAGKDSRYSTISAHNASRTGYNFRKWVQEDEGEYSGNTGPWI
IFRKAEFYLNYAEAQIALGNESEARTAINEVRERVGMPPLTVSGEELVERYRNERRVELV
LEDHRFFDVRRWTIAPEEFSETVTGVNVYKDGDDYVYSYDLITDDTKVWEDRMYFLPIPI
DEVQRSGNSLEQNPGYQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaattatagaaaattatatatatatctgatcgcagtattgtcagtattagcttcatgt
tctgatgatatactagatacaaaaccactagatggttatagcgaaatagacgttttcgct
gatgaagccttattaaggaattatgtaaatggaacttatagaggttttcgtcatccattt
gataatgaaaactcattaacagatggactaacggataatgcttttaatcagcatggtagt
gcagagggtactattaaaacctatacaagagcagaagtaaacccaagtaatggtgaaggt
atcactagaagcttatgggcaactgcttatgcttatattagaagaacaaatgtttatttt
gaaggaactgtagattctcaaataaatgaagaagcactttctgtgatggatggtgaaatg
cggtttattagagcatttctttatttcgatctattaagatggtatggtggtgttcctttg
attacaactacatttgagctagatgatgaaaatatggcagtttcaagaaactcatcagaa
gaaatagctagctttattgttgaagaatgtgacttagcaatcgaagaattattatctgtt
gctgatggtgattacgaattaggtagagcttcaatagaagcagcaatggctctaaaagca
cgtactttattatacattgctagtccattatataatgaagaaggagacatgtctagatgg
caagcagctagcgatgctaatcaagctgttatggaattatcaacagtttctttagtacaa
gctgctgataatccaaatgcctacggtgagttatttactgcagactttactgaagaagca
atcttttcaagatatttcacagaagtaaataaccaaggttatggagtaaatacttggctt
tttccaaacagtaatggaggttgggctaatactactccttctcaagatttggtagatagt
tatgagttaactaatggtaacttaccttcaaacccagaatcaggttacgatgatcaagat
ccttatgttaaccgtgatccaagattctaccaaaccattctttataatggagctcctttt
aaagatgctgaatatgagtactttttagatataaatgatcctaccaattctgcattagca
ggtaaagattctcgttactctacaatttctgcacataatgcatcaagaacaggatataac
ttccgtaagtgggtgcaagaagacgaaggagaatattctggtaacactggtccatggatc
atattcagaaaagcagaattctatcttaactatgctgaagcacaaattgctttaggcaat
gagagtgaagctagaacagcaatcaatgaagttagagaaagagttggaatgcctccttta
acagtgagtggcgaagaattagtagagagatacagaaatgaaagaagagtagagttggtg
ttagaagatcatagattctttgatgtaagaagatggactattgctcctgaagagttttct
gaaactgttactggggtaaatgtttacaaagatggtgatgattatgtctatagttacgat
ttaattacagacgacactaaagtgtgggaagatagaatgtatttcttaccaattccaatt
gatgaagttcaaagaagtggaaattcacttgaacaaaatcctggctaccaataa
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