Chondrinema litorale: OQ292_22290
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Entry
OQ292_22290 CDS
T09098
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20968
AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clit03000
]
OQ292_22290
Transcription factors [BR:
clit03000
]
Prokaryotic type
Helix-turn-helix
AraC family
OQ292_22290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
TaqI_C
Cupin_3
Cupin_2
MPI_cupin_dom
Motif
Other DBs
NCBI-ProteinID:
UZR96389
LinkDB
All DBs
Position
unnamed2:complement(472821..473663)
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AA seq
280 aa
AA seq
DB search
MDHISKYLTPEIKLSCYDDKFFKSEIVFDQHMLIWFISGETKIVQAEATHYFKTGDIFLI
PRNKPATVINYPKDGLPHKTVVMLLTSDILRSYYKSIEPQVKTLPIPSICSFKNHPLLAS
CLASLIPYFDLNEPMPQYLALLKINEAISILRTIDNEIDSILANFDDPYKVDLISFMEKN
YMFNMPMEKFSYLTGRSLTSFKRDFKKAFNTTPQRWLTQKRLELAHYQLSENNRKPIDAC
YESGFENLSHFSFAFKKRFGYPPTSLIDQKSSRLGIKMLK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggatcatatatcgaaatatctgacacccgaaattaagctttcttgttacgacgataag
ttttttaaatcagagattgtgttcgatcagcacatgcttatttggtttatttctggtgag
actaagattgttcaggcagaagccacacattatttcaaaacaggagatattttccttatt
ccaagaaacaagccggccacagtcatcaattatccgaaagatggcttgccacataaaacc
gtggtgatgttgttaacttcagatattttaagaagctattataaaagtatagagcctcaa
gttaagactttgcccatcccaagtatttgtagttttaagaatcatcctttgttggcgagt
tgtttggcttctctaattccttatttcgatttgaacgaacctatgcctcagtatctagcc
ttgctaaaaattaatgaagccattagcattttaagaacaattgataatgaaattgacagt
attttggccaattttgacgatccttacaaagtcgatttaatcagttttatggaaaagaac
tacatgtttaacatgccgatggaaaaatttagctatctaacaggtagaagccttactagc
tttaaacgggattttaaaaaagcttttaatacaactcctcaaagatggcttacacaaaag
cgtttggaattagcacattatcaactctcagaaaacaatagaaaaccaatagatgcatgt
tatgagtctggcttcgaaaacctgtctcatttttcctttgcttttaaaaagcgttttggt
tatccccctacaagtttaatcgatcaaaaaagtagtagattagggattaaaatgctcaaa
tag
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