Chondrinema litorale: OQ292_23555
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Entry
OQ292_23555 CDS
T09098
Name
(GenBank) oligogalacturonate lyase family protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
clit
Chondrinema litorale
Pathway
clit00040
Pentose and glucuronate interconversions
clit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
OQ292_23555
Enzymes [BR:
clit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
OQ292_23555
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
UZR97079
LinkDB
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Position
unnamed3:complement(164188..165489)
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AA seq
433 aa
AA seq
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MYLQSNFLTQKTLAKLDIFFILIALLSSCANPQRIPEMETGGQKPMSSVEWIDQDTGHKL
IKLTRSGADNRSFYFHNNPFIPAHGDEGDLMVFYGSEEVRKSDHWYKGKDIKQLFTLNLK
SLEIKQLTHHSASISGEIVGKKRREVFYQSSDTVFAVNVDNAKSRIIYVFPDSLTQAKIT
TLNADEQLLAGVYSIAEKDSILKNNPRKGDYFNLIYEAKLPHTLFTLNVDDQKISQIHSD
SAWLNHVQFSPTDPERLMFCHEGPWHFVDRIWSMNIHDETPMLMHKRTVEREIAGHEFFS
RDGKTIWFDLQIPRGETFYLAGANVETGEEKKYAMTRDEWSIHFNISPDQSIFVGDGGDS
TQVARAKDGMWLYLFRTEGDSLHSEKLVNMKHHNYDLEPNVHFSPDGKWIIFRANFEGSS
QIYAVDIEKDESF
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacaatcaaactttctaacacaaaaaactttagcaaagctcgatatctttttc
atattaatcgctttacttagctcctgtgcaaatcctcaaagaatccctgaaatggaaact
ggagggcaaaaacctatgtcttcagtagaatggattgatcaggatacaggtcataagttg
atcaagttaacacgctcaggagctgataatcgcagtttctattttcataataacccattt
attcctgctcatggtgatgaaggtgacctgatggtattttatggaagtgaagaggtaagg
aaatcagatcattggtacaaagggaaagacatcaaacaactttttaccctaaatttaaaa
tccctagaaataaaacagttaactcaccactcggcttccatctctggggaaattgtagga
aaaaagcgaagagaagttttttatcaaagtagtgatactgtatttgcagtaaatgttgac
aatgcaaagtctagaatcatttatgtttttccagatagcttaacacaggcaaaaattact
actttaaatgctgatgaacaattactagcaggtgtttacagcattgccgaaaaagattct
atcttgaaaaataatcctagaaaaggtgattatttcaatttgatttatgaagccaagtta
cctcataccctatttactctaaatgtggatgaccagaaaatttctcaaattcatagcgat
tctgcttggcttaaccatgtacaattctcaccaactgaccctgaaagactcatgttttgc
catgaaggtccttggcatttcgtggacagaatttggagtatgaatatccatgatgaaact
ccaatgctcatgcacaaaagaactgtagaaagagaaattgccgggcacgagttttttagt
agagatggaaaaactatttggttcgatctacaaattccaaggggtgaaaccttttatctg
gcaggtgctaatgtagaaactggtgaagaaaagaaatatgcgatgactcgtgatgaatgg
tctattcactttaatatttctcctgaccaaagcatttttgtgggagatggcggagattct
acccaagtagcaagggcaaaagatggcatgtggttgtacttatttagaactgaaggtgat
agtttgcactcagaaaaactggttaatatgaaacatcataactatgatctggaaccaaat
gtacatttctcaccagatggtaaatggattattttcagagccaattttgagggtagcagc
cagatttatgctgttgatattgaaaaagatgaatccttttaa
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