Chondrinema litorale: OQ292_24485
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Entry
OQ292_24485 CDS
T09098
Name
(GenBank) DUF5107 domain-containing protein
Organism
clit
Chondrinema litorale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5107
TPR_2
TPR_12
TPR_16
TPR_8
TPR_19
TPR_11
ARM_TT21_5th
T7SS_EccA1_N
TPR_1
TPR_17
NatA_aux_su
DUF3856
ARM_TT21_2nd
Foie-gras_1
Motif
Other DBs
NCBI-ProteinID:
UZR96858
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Position
unnamed3:complement(396776..400117)
Genome browser
AA seq
1113 aa
AA seq
DB search
MKNLVTSKFSKRTIPTYELGKPEINPVFFEKRVYQGSSGKVYPVPFIDKVYDQKVQTQYD
EAILENEFVRLVMLPEIGGRIFEAQDKSNNNYDFFYKQEVIKPALVGLAGPWISGGVEFN
WPQHHRPGTYLPTDTYLEEEADGAKTFWMSEYDPMYRLKGMHGIRIRPGSSLIELRARLF
NRTPLTQTFLWWANVAVRVHEQYQSFFPLDVHYVADHAVRAMSSFPIAENHYYGVPYHER
EGKNDLRKYENITVPTSYMVCDTKYNFFGGYDFKTDGGFIHVANRHIAPGKKQWTWGSEE
FGKAWDRELTDSGGPYFELMAGVYTDNQPDFSYLLPFETKTFSQFWWSYKKLGPVQNATK
DLAIRLDLQQGNKLDVGLAASKSFEALNISIQIGETQHLINKVAISPDNPWLGGGFTFQS
GEEDKISMSVFDATGKLLINYKHIEIDKTRNRKVAFEPKQPENVASSIELEMIGEHLELY
RHPTRYPEPYWKEAIKKDPKNYKAYISLGKSELKLGKINEAKKYLQTATEVMTTYHPNPS
NGEAYYFLGLTYFYTGELDLAYSALYKATWNFEWRASAYYVLAKIDCIKFDFETALEQIE
AALDTNRQNNSAIILKAVVLHKIGQKDQAQLILEDLQKIDALDQWANYELATIIHDFAAF
LKSSRNDAQTIIDIAFEYAEAGCYQEAIELLKLHLANDVAECAVPNPMGQSVMPKFILSW
LYAKIGNKSESQEWLEQASKSSFNYFFPSRLSEQLVLEWALQQMPDCHLAAYGLGNYFFN
LKRHKDAIKVWEQAATSNCKYATLYRNLGIAYWNTQTDGEKAKASFTKAIDLAPEDMRIH
FEFDQLCKKLNNDPTLRLKKIESLGDLILSRDDFSVELAALYNYAVRYEKALDLLTHRNF
HPWEGGEGQVLKQYTYACLKLGQQALAKGDAKLAITYFEKSLNTPDNLGEKYHPLQAKAH
INYWKGMACKAGGLAEEAVKYFTESATENGDFIDMAVSDYSEMSFYKALSLKELGKQDEA
LKIFKGMKNFSNKKLTETVKIDYLATSLPLLLVFEDDIQLRNEIDAKHLLALAHIGLGNK
TEAKKLLDYVKALNTMHTGVKEALLFIKSEVVS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatttggtaacatcaaagttctctaagagaacaatccccacatacgaattgggt
aaacctgaaataaatcctgttttttttgaaaagagagtctatcaaggttcatcgggaaag
gtatatccagtgccttttattgataaagtttacgatcaaaaagtacaaactcaatatgat
gaggctattctagagaatgaatttgtaagacttgtaatgctacctgagattggtggacgc
atctttgaagcgcaagacaagtcgaataataattacgattttttctataaacaagaagta
ataaaaccggcattggtgggtttagcaggtccttggataagcggtggagtagagtttaac
tggcctcaacatcaccgaccagggacttatctaccaacagatacttatcttgaagaagag
gctgatggagctaaaactttctggatgtcagaatacgatcctatgtatcgcctaaaaggg
atgcatggcattcggattcgacctggaagttcgttaatcgaattaagagcacgattattt
aatcgtactccactcacgcaaactttcctttggtgggcaaatgttgcggtgagagttcat
gagcaataccagagtttttttccactagatgttcattatgtggccgaccatgcagtgaga
gcaatgagtagttttcctattgcagaaaatcattattatggagtgccgtaccacgaaaga
gaaggaaaaaacgacttgcgtaaatacgaaaacattactgtgccaaccagttatatggtt
tgtgatacaaaatataatttttttggaggatacgattttaaaactgatggtggatttata
catgtggccaacagacatatagctcccggcaaaaaacagtggacttggggtagtgaagaa
tttggaaaagcatgggacagagagttgactgatagtggaggtccttattttgaattgatg
gcaggtgtttacaccgacaatcaaccagatttctcatacctacttccttttgaaactaaa
acattttctcagttctggtggagctataaaaagttgggtcccgttcaaaatgctactaaa
gacttagctatccgattagatttacaacaaggtaacaaacttgatgtaggtcttgcagcg
agcaaaagttttgaagcactaaacatttcaatacaaataggagaaacacagcacttgatt
aataaagttgctatttcaccagataatccttggcttggaggaggttttacattccaaagt
ggagaagaagataagatttcgatgtcagtttttgatgcgactggtaagttactaatcaac
tataagcatatagaaatagacaaaactcgaaacagaaaagtagcttttgaacctaaacag
ccagaaaatgtagccagttctattgagctagaaatgattggagagcatttagaactatat
cgtcatccaactagatacccagaaccctactggaaagaagccattaaaaaagacccaaaa
aactataaagcatatatctctttgggtaaatctgagctgaaacttggtaagattaatgaa
gctaaaaaatatttgcaaactgccactgaggtgatgaccacttatcatccgaatccatct
aatggagaagcatattattttcttggcttaacttatttctacactggtgaattagattta
gcttattcagcactttataaagctacatggaattttgaatggagagcttctgcttattat
gttttagcaaaaatcgattgtataaaatttgattttgaaacagctcttgaacagatagaa
gctgccctcgataccaaccgtcaaaataatagtgcaattattctaaaagctgttgtgctt
cataaaataggtcaaaaagatcaagcacaattaatattagaagatttgcaaaaaatagat
gccttagaccaatgggcgaattatgaacttgcaacaattattcatgattttgcagcattt
ttaaaatcttcgagaaatgatgcacaaacaattatagatattgcttttgaatatgcagag
gctggatgttaccaagaagcaatcgaactgcttaaactccatttggcaaatgatgtagca
gaatgtgccgtgccaaatccaatgggacagtctgtaatgccaaagtttattttatcttgg
ttatatgcaaaaattggaaataaatcagaatcgcaagaatggttagagcaagcaagtaaa
tcctcattcaattactttttcccatctcgtttaagtgaacagttagttttagaatgggca
ctccaacaaatgccagattgccatttagcagcttatggtctaggtaattatttctttaat
ctaaaaagacataaagatgccataaaagtttgggaacaagcagcaacttctaattgcaaa
tatgctacgctgtatagaaacctcggaatagcttactggaacactcaaactgacggagaa
aaagccaaagcctcatttacaaaagcaatagatttagctccggaagatatgcgtatccat
tttgagtttgatcaattatgcaagaaattaaataacgatcctactttgaggttgaaaaag
attgaaagccttggcgatttgattttaagtagagacgattttagtgtagagttagctgca
ctttataattatgcagtgcgatacgaaaaagccttagaccttttaactcatcgaaacttt
catccttgggaaggtggagaagggcaagtattgaaacaatatacttatgcttgcttaaaa
ctcgggcaacaagcattggcaaaaggtgatgcgaaacttgctataacatatttcgaaaag
tcgttgaatacacccgataatttgggcgaaaaataccatccacttcaagcaaaagcacac
atcaattattggaagggaatggcatgtaaagctggtggtttagcagaggaagcggtaaaa
tattttacagagagtgctactgaaaatggagactttattgatatggctgtaagcgattat
tctgagatgtctttttataaagcactgtctcttaaagagcttggcaaacaagacgaggca
ttaaaaatctttaaagggatgaaaaacttctcaaataaaaaattaacagaaactgtaaag
attgactatttggctacatcacttccgttacttttagtttttgaagatgatattcaatta
agaaatgaaatagatgccaagcaccttttagctttagcacatattggattgggtaataaa
acggaagctaaaaaattactggattatgtaaaggctcttaacaccatgcatacaggagta
aaagaagctttattatttataaaaagtgaagttgtatcttaa
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integrated database retrieval system
