Chondrinema litorale: OQ292_25015
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Entry
OQ292_25015 CDS
T09098
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_25015
Transporters [BR:
clit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OQ292_25015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_8
TPR_1
RPN2_N
Motif
Other DBs
NCBI-ProteinID:
UZR97163
LinkDB
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Position
unnamed4:11372..13021
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AA seq
549 aa
AA seq
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MKKVILSIIMAALFTACDIDRFPYDSIASEELFAGEGGLESATLGNYALLKGDADGNGFA
PQLHRLTEYPGDNVSLSGTTTDPLFYTYNYHNITTSSRANNLWSAGYKAVVGCNKVIELA
SEGESVEMDHLIGENYYLRGLIYFQLVNVFGRPYSQGTSNLGVPLKTTSSIEDLPDRNTV
GEVYEQVVQDLLKAETLMSLTKTNSYATQEAAQALLSRVYLYMEENDKAIEFADKVINSG
QFSLVSTSSLPSYFNMNPDDNPETIFCFKYLEESDYNHGWYTVGSMYANIQGSGWGEMYA
SSSYLELLNQHPEDARINFIEPQYLTDTEGNKIPVVYWIDDTYKYQFRETFEDGGVTYFT
ENETNYEVMSEQDGDLTKYYFTNSSNEKVSLIMDYDMDKRNGYPKFYILKASLQDDVPQL
WSPVVSRLAELYLNKAEAYAKLGNTSMALENVNIIRERAGIPTYGSAADFPEGQEIMDVV
LDERRMELAYEGHRKFDVFRNNRVLDRHYPGTHLNGNNPYYEVEPTDDRVIEYIPESQII
AQPSLIQNQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagttattctctcaattataatggctgctctttttacagcctgtgatatagat
cgcttcccttatgattccatcgcttcagaagagttatttgctggcgaaggtggtttggaa
tctgctacgctcggaaactatgctttactaaaaggagatgcagatggcaatggctttgca
cctcagttacaccgtttaacagagtatcctggagataatgtttctctaagcggaacaaca
acagacccattgttctatacttacaactaccataatattacaaccagtagcagagctaat
aatttatggtctgctggttacaaagctgtagttggttgtaacaaagttatcgagcttgca
tcagaaggtgagtctgtggaaatggatcatttgattggtgaaaactactacctaagagga
ttgatctacttccaattggtaaatgttttcggcagaccttattctcaaggaacttcaaat
ttgggagtacctcttaaaacaacatctagtatagaagacttaccagacagaaacacagta
ggcgaagtttatgagcaagtagttcaggatttattaaaagctgagactttaatgtctctt
actaaaaccaattcttatgcaactcaagaagctgcacaagctttactttcaagggtttat
ttgtacatggaagaaaacgataaagccattgaatttgccgataaagtgattaattctggt
cagtttagcttggtttctacaagcagcttgcctagctatttcaacatgaatccagacgat
aacccagaaacaattttctgttttaaatatctggaagaatctgattataaccacggttgg
tacactgtaggaagtatgtatgcgaacattcaaggttctggttggggagagatgtatgct
tcaagttcttatcttgaattattaaaccaacacccagaagatgctagaattaactttatc
gaacctcaataccttaccgataccgaaggaaataaaattcctgtagtttactggatagac
gatacttacaaatatcagtttagagaaacatttgaagatggtggagttacctattttacc
gaaaatgaaaccaattacgaagtaatgtctgaacaagatggagatttaaccaaatactat
ttcactaacagcagtaatgagaaagtatcgctaataatggattatgatatggacaagcga
aatggctatcctaaattctatatcttaaaagcttctctgcaagatgatgtgccacaactt
tggtcgccagttgtatcgagattggctgagttatacctaaacaaagcagaggcttatgca
aaattaggtaacacaagtatggctttagagaatgtaaatattattagagaaagagctggt
attccaacttacggttctgcagcagactttccagaagggcaagaaattatggatgtagtg
ttggatgaaagaagaatggagttggcttatgaaggacacagaaaatttgatgtgtttaga
aataacagggtgttggatagacattatccggggacacacttaaatggcaataatccatat
tacgaggtggagccaactgatgacagagtaattgaatacattcctgaaagtcagattatc
gcgcaaccatcactcatacaaaaccaatag
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