Chondrinema litorale: OQ292_26970
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Entry
OQ292_26970 CDS
T09098
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_26970
Transporters [BR:
clit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OQ292_26970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
UZR97453
LinkDB
All DBs
Position
unnamed5:complement(229825..231759)
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AA seq
644 aa
AA seq
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MKKQYKILAMLLGIIVISCQELDLEPKGILGEPELFGNEFGVKKYFSGIYNDLPIEDFLY
FGTDSENAYRPDNYWEQGKKSLGNMSGEFFNSWVGVDNDGFAYWPYGRIRDINTFIQNFA
EYKENYKEDVYNELLGEAHFLRAFYYFGLAKRYGGVPIIKEVQSPLDDAETLEVPRNTEY
ETWKFIYEDLTFAIENMASGSEVGRANKYVAAALLSRTMLYAGSIAKYSQYLGFQGEAAT
AAGLAGMEASQADEFFQYCVEAGKIVEQGPYTLYTKDYPDKATNFANLFLDPTSSESIFI
KDYDMTAPQNTRLRHSYDALMSPQPDMSSFVGAESYPPLDFMELFEMPAYVNADGTPVRF
DNRSDIKNGMEPRMLGTMYFDGDELRGSTFSIQKGIYRSFNALAADAENGSSAASINSAD
NRILGGRGWTTEIDGVTYNITGAHGHFDDQGGENNGWGSAFIRKYVNPDMPTNDVREYRS
GQHWVVFRLGEIYLNSAEALYELGQRDEAFNYIEMIRERAGATVTRPAIDMATTNIGTIN
NANYPYQVENSLQFIRDERARELYGENHWWWDLRRWRTADQVLNQFRHRVLSCYFVADEG
KYIYIDEINRWNRSWTASNACYYEPIPWGEIGKNENLLPQNPLY
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcaatataaaatattagcaatgctcttgggcataatagtaatatcatgtcaa
gaattggatttggaacccaagggtatattaggtgaacccgaactttttggaaatgagttt
ggtgtaaagaagtacttctctggtatttataatgaccttccgatagaggatttcctatac
tttggaacagattcagaaaatgcttatcgcccagataattattgggaacaaggcaaaaaa
agtctgggaaatatgagtggcgaattctttaattcttgggttggtgtagacaacgatggt
tttgcttactggccatatggtcgtattcgtgatataaatacttttatccagaacttcgca
gagtataaagaaaattataaagaggatgtttataatgaattgttgggagaagcacacttt
ttacgcgccttctattatttcggattggctaaaagatatggcggagttccgattattaaa
gaagtacaaagcccgctagacgatgctgaaacattagaagttcctagaaacacagaatac
gaaacatggaagtttatctacgaagatttaacctttgcgattgaaaacatggctagtggt
agcgaggttgggagagcaaataaatatgttgccgctgccttgttatctcgcacaatgtta
tatgcaggatcgattgcaaaatactctcaatatttaggttttcaaggagaagcggctact
gctgctggacttgccggaatggaagcatcacaagctgatgagtttttccagtactgtgta
gaagcaggtaaaatagttgagcaaggtccatatactttgtataccaaagactatcctgac
aaagcgacaaactttgcaaatctgttcttagacccaacctcttctgaaagcattttcatt
aaagactatgacatgacagcccctcaaaacacgcgtttgagacacagttatgatgcttta
atgtctccacagccagatatgtcttcttttgtaggagctgaaagttaccctccattagat
tttatggaattgttcgaaatgccagcctatgtaaatgcagatggaacaccagttcgattt
gataaccgaagtgacattaagaatggtatggagccacgtatgctaggtacgatgtatttc
gatggagatgagttgcgtggaagtacttttagcattcaaaaaggtatttacagaagtttt
aatgcgctagctgctgatgcagaaaatggtagcagtgctgcttcaattaacagtgccgat
aatcgaatcttaggtggcagaggctggacaaccgaaattgatggggttacttataacatc
accggagctcatggccattttgatgatcaaggtggagaaaacaatggctggggatcagct
tttattcgcaaatatgtaaacccagatatgccaaccaacgatgttcgtgaataccgcagt
ggacaacattgggtagtatttcgcttgggtgaaatctatttaaattctgcagaagctctt
tacgaattaggccaaagagacgaagcttttaactatatagaaatgattcgcgaacgtgct
ggtgccacagttactcgcccagcaatcgatatggcgacaacgaatattggtacgattaac
aatgcgaattatccatatcaagtcgagaattcattgcaatttattcgcgatgaacgtgca
cgtgaactatacggtgaaaaccattggtggtgggatcttcgcagatggagaactgccgac
caagtattaaatcagttccgtcaccgtgtgttgagttgctactttgttgctgatgaaggg
aagtacatttacatcgatgaaattaatagatggaataggagttggacagcttccaatgca
tgttattacgagccaattccttggggtgaaattggtaagaacgaaaatctcctacctcaa
aatccactttattaa
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