Chondrinema litorale: OQ292_29420
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Entry
OQ292_29420 CDS
T09098
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clit03400
]
OQ292_29420
Enzymes [BR:
clit01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
OQ292_29420
DNA repair and recombination proteins [BR:
clit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
OQ292_29420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UZR97937
LinkDB
All DBs
Position
unnamed7:complement(241637..243121)
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AA seq
494 aa
AA seq
DB search
MSTTISLVFPHQLFEQSPLLELDHSIYLIEEYLFFKQYKFHKTKLAFHRASMKFYASYLA
EKGKEVNYIDCNKKEADIREFINNVKGKVDCIHYLNPTDNWLEKRIEKTAKTCSIELKEY
ENKLFLNTREDNQHFFKASKKKFFQATFYKQERKKRNILIEEDGEPVGEKWSFDAENRKK
FPVKKEAPKISYPYTKNTYKEAVKYVEKHFSKNPGKLSEKQLYPYDFDDAKKWLDEFLEE
RFKEFGDYEDAIVAKESILNHSLLTPMLNTGLLTPQFVLESALEFAKKKDIPINSLEGFV
RQIIGWREFIRGVYECKGSDERTRNYWGFSRKIPTSFYDGSTGIEPIDKTIKKVLETGYC
HHIERLMVLGNFMLLCEFDPDEVYRWFMELFIDAYDWVMVTNVYGMSQFADGGLMATKPY
ISSSNYLMKMSDYKKGDWQKIWDALFWRFMHIQRDFFEKNPRLNMLINTYDKMPAVKRNN
YLETADKFLEKLDA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaacaatcagccttgtatttcctcatcaattgtttgagcaaagtcctttgttg
gaattagatcattccatctacttaatagaagaatatctattttttaaacagtataaattc
cataaaaccaagttggctttccatcgagctagtatgaaattttatgcttcttacttagca
gaaaaaggcaaagaagtaaactacattgattgtaataaaaaggaagctgatattcgagaa
tttatcaacaatgtaaaaggcaaagtagattgtatacactatctgaacccgacagataat
tggttagaaaagcgtattgagaaaactgctaagacttgtagtatagaactgaaagaatat
gaaaataagctttttttgaacaccagagaagacaatcaacatttttttaaagcatcaaaa
aagaagttttttcaggctactttttataagcaagaaaggaagaaaaggaatattttaatt
gaagaagatggagagccagtaggagaaaaatggtcgtttgatgcagaaaacagaaagaag
tttccagttaaaaaagaagctccgaaaatctcatatccttatactaaaaacacttataaa
gaagctgtaaaatacgtagaaaaacattttagtaagaatccgggaaaactctcagaaaag
cagttatacccctatgattttgatgatgctaaaaagtggctcgatgaatttttagaagag
cgatttaaagaatttggcgattacgaagatgccatagtagctaaagaaagcatactgaat
cacagtctgttaactccgatgttaaatacaggtttactcactccacagtttgttctcgaa
agtgcactggagtttgccaaaaagaaagatattcccattaactctttagagggttttgta
aggcaaataattggttggcgtgagtttataagaggtgtttatgagtgcaaaggttcagac
gaacgcactagaaattactggggttttagcagaaaaataccaacatcattttacgatgga
agcacaggaattgaacccattgataaaacgataaaaaaggtgttggaaacaggttattgc
caccacatcgagcgacttatggtgttgggaaattttatgttgctctgcgagtttgatccc
gacgaagtttatcgttggtttatggaattgtttatagatgcctacgactgggtaatggta
accaatgtgtatggtatgagtcagtttgcagatggtggtttaatggcaaccaaaccgtac
ataagcagtagcaattacctcatgaaaatgagcgattacaaaaaaggagattggcagaaa
atatgggatgcacttttttggcgctttatgcatattcagcgagatttctttgagaaaaac
ccacgcttaaacatgctgatcaatacctatgataaaatgcctgccgtaaaaaggaacaac
tacctcgaaaccgccgataagtttttagaaaagttagatgcttag
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