Chondrinema litorale: OQ292_31940
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Entry
OQ292_31940 CDS
T09098
Name
(GenBank) D-ribose ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
clit
Chondrinema litorale
Pathway
clit02010
ABC transporters
clit02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OQ292_31940
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
OQ292_31940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_31940
Transporters [BR:
clit02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
OQ292_31940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
UZR98563
LinkDB
All DBs
Position
unnamed10:complement(190130..191023)
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AA seq
297 aa
AA seq
DB search
MLISCSQSRKESEGNKKIAVVISTLNNPWFVVLGEAAAKRARELGYETTIFDSQNNTAKE
AEHFENVISAGYSAILFNPTDTEGSVSNVKRAKEAGIPTFCMDREINSLDLAATQIMSDN
FSGCVELGQYFVRKLNKKGKYVELLGLVGDNNTWNRSKGFHSVVDNFPEIEMVAQQSADF
DRNKAMEVLESILQSHPNIDAVFCGNDAMAMGAYQALLAAGKAESIMIFGFDGADDVLQA
INDNKIEATAMQSPKLMAQKAAEFADQYIKGNKDFEKKIPIAVEVVTQNNIEKFAIK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcttatttcctgttcccagtctcgaaaagagtctgaggggaataagaaaatagccgtt
gtcatttcaacactcaataacccttggtttgtggttttgggagaagctgctgcaaaacga
gcgcgtgaacttggttacgaaaccaccattttcgattcacaaaataacaccgccaaagaa
gctgaacattttgagaatgtaatttcggctggttattctgccatcctttttaacccaaca
gatacagaaggttcggtctctaatgtaaagcgtgcaaaggaagcaggcattccaacattc
tgtatggatagagagattaactcattggatttggctgcaacccaaattatgtctgataat
ttttctggctgtgtagaactgggacaatactttgtgagaaagctgaataaaaaaggcaag
tatgtggaattactgggtttggttggcgacaacaacacatggaatcgctcaaaaggtttt
cacagtgtggtagataacttcccagaaattgaaatggtggcacaacaaagtgcagatttc
gaccgcaacaaagcaatggaagtgttggaatctatcttacaatctcatccaaatattgat
gctgtattttgtggaaacgatgccatggcaatgggtgcttatcaagctttgttggctgct
ggtaaagccgaaagtattatgattttcggttttgatggtgcagatgatgttcttcaagcg
attaacgataacaagatagaagcgacagccatgcaatcgccaaaacttatggctcaaaaa
gccgcagaatttgcagaccaatacatcaaaggaaataaggattttgaaaagaaaattcct
attgcagtcgaagtagttacgcaaaacaacatagagaaatttgctataaaatga
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