Chondrinema litorale: OQ292_33805
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Entry
OQ292_33805 CDS
T09098
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_33805
Transporters [BR:
clit02000
]
Other transporters
Pores ion channels [TC:
1
]
OQ292_33805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
SdrD_B
fn3_3
Dioxygenase_C
NOMO_3rd
Motif
Other DBs
NCBI-ProteinID:
UZR98976
LinkDB
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Position
unnamed13:6008..8377
Genome browser
AA seq
789 aa
AA seq
DB search
MKTLYLITIFLLVTITLQAQNTGIITGKITMLGNQPVASASVAIIELGKRTLTDEQGYYT
FDNIVDGKYTIHIQVLGAPVQNIPVVVSAGKSVTIDYEFPEENILVLQEIRINSDQKKFT
NKESIYIARLPVKNLENPQVYNSVSKELIQEQMAVDLGSISKNVPGAGVPTIANQGRVTF
RSRGFDTEPNARNGVAGAAFAAIDPANLERVEVIKGPSTTLFGTNIASSYGGLYNRVTKK
PFNGVGGEVAYYGGSWNFNRISWDANTPLNAEKTALFRLNGATSFERSFQDLGFTKSLSI
APSFSYQITDKLSLLLDVEFGQAKGTSVVRFNPYIGSNKTQSIADMQFPYNRNFLSNDLT
YSTQMMNIFAQLNYKISENWTSQTIISRARSTIDGYITALIGRSDSTIRPRIIVGNTSFI
ATDLQQNFIGDFNIGNHRNRVVIGLDYYNNSNSFDRVTVNTTTMNFINPSPDYSISRLEV
DTLTATGSLRKENSGDDTYAVYISDVFNVTDRLLLMGSLRLDRYEYNGVYDITSGTTSGG
LGTSGIQAGPYGQTALSHKSGLVYQLAEDRASIFINYMNAFFNKSGVSADGTQFKPEHAN
QLEFGLKGNLFDHRLVGTISYYDIRVENILRTDPDDINFSLQDGTQLSKGIEIDITANPF
PGFSIVAGYAYNDSEYTKSDESVEGLRPAQSGPENMFNFWMSYKITNGNLEGLGVGFGGN
AGDESYQTNTQTAKVIIPSYTMLDASIFYDRTKYRIGFKVDNLTSEKAWSVRLTPQAPAR
FIGSMSLKF
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctatatttaattactatttttttactagttactattacacttcaagcacaa
aatacagggataattactggaaaaattaccatgctgggtaatcaacctgtggcttctgct
tcagtggctattattgaattggggaaaagaacccttaccgatgagcaaggttattatact
tttgataatattgttgatggtaaatacactatacatattcaagtattaggagctcctgtg
caaaacatacctgttgttgtttctgcaggcaaatcagtaacgattgattatgaatttccc
gaagaaaacattttagtcttacaggaaatcaggataaattctgatcaaaagaaatttacc
aacaaagagagtatttatattgccagacttcccgtaaaaaatctggaaaatccgcaggtc
tataattctgtctccaaagaattgatacaggaacaaatggcggtggatttaggtagcatt
tctaaaaatgttccaggtgctggagtgccaacaatagccaatcagggaagagttactttt
cgatctagagggtttgatacagaacctaatgccagaaatggtgttgctggtgctgcattt
gcggcaattgatcctgccaaccttgagcgtgtagaagtaattaagggtccttctactaca
ttgttcggaaccaatatcgccagcagttatggtggattatataatcgcgttactaaaaaa
cctttcaatggtgttggtggagaagtagcttattatggaggtagttggaattttaataga
atctcttgggatgccaacacacctcttaatgctgaaaaaacagctttgtttcgtctaaat
ggagctacatcttttgaaagaagttttcaggatcttggttttacaaagagcttgagtatt
gctcctagtttttcatatcaaataaccgataaattatcattattattagatgtggaattc
ggacaggcaaaggggacttctgtggtaagatttaatccttatataggtagtaataaaaca
caatctattgctgatatgcagtttccatacaatcgaaactttttaagcaatgatcttact
tattctacccaaatgatgaacatatttgcacaactaaactacaaaatttctgaaaactgg
acttctcaaaccattatttctcgtgcacgatccactattgatggatacattactgcttta
atcggtagaagtgattccaccattcgacctagaattattgtaggtaatacttcttttatt
gccactgacttacaacaaaattttattggtgattttaacataggtaatcatcgtaatagg
gtagtaattgggctagattattacaacaactctaatagttttgatagggttactgtaaat
acaactactatgaactttatcaatccttctccagattatagcattagtcgattagaagtg
gataccctcacagcaactggttcattacgaaaagagaatagtggagatgatacctatgct
gtttatatatcggatgtttttaatgtgacagataggttattgcttatgggaagcctcaga
ctcgatcgatatgaatataatggagtttatgatataacgtcgggtacaacttcaggaggg
ctgggcacaagtggaatacaagccggcccttacggacaaaccgccttatcccataaatct
ggattagtgtatcagttagccgaagacagggcttccatatttatcaattatatgaatgct
ttttttaataaaagtggggtttcagcagatggcactcaatttaaaccagaacatgccaac
caattagagtttggactaaaaggtaatttattcgatcatcgcctagtaggaacaatcagt
tattatgatataagagtagaaaatattttacgaacagatcctgatgatataaacttttct
ttacaagatggaacacaattgagcaaaggcattgagatagatattacagcaaatcctttt
cctggattttccattgtagctggttatgcttataatgatagcgaatatactaaatcagat
gaatctgttgaaggtcttcgaccagctcaatcgggtcctgagaatatgtttaacttttgg
atgagttataaaataacaaacggcaatttagaagggttaggagttggttttggcggaaat
gcaggagatgaatcatatcaaacaaatacacaaacggctaaagtcattattccttcttat
actatgttagatgcaagtatcttttacgatcgcactaaataccgtattggtttcaaagtt
gataacctaactagtgagaaagcttggtcagtaagattgactcctcaagcaccagcaagg
ttcattggtagtatgagtcttaaattctaa
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