Chondrinema litorale: OQ292_34430
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Entry
OQ292_34430 CDS
T09098
Name
(GenBank) heparinase II/III family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
OQ292_34430
Enzymes [BR:
clit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
OQ292_34430
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Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Motif
Other DBs
NCBI-ProteinID:
UZR98949
LinkDB
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Position
unnamed13:complement(147956..150202)
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AA seq
748 aa
AA seq
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MKRLSPILIVFIFLACNEKVNKDSIKEHPNLILTIKAVNSMRASLGEISLFDQSVEEIRA
QVDAEIEFGIEVPIPKDLAGGYTHERHKTNFFTMQKAGVLFQITAEEKYAIYIRDMLLKY
AEMWPTIGKHPAEKSYARGKLFWQCLNDANWLVYTSQGYDCIYDWLDGQTREKLNKELFR
PYAEYISVENPQFFNRIHNHSTWGNAAVGMIGLVIGDKELVNWSLYGLDIEVPGDIVKDN
DGGTIQIDGQKEAGFLAQIDHSFSPDGYYTEGPYYQRYAIYPFLVFAQGLANKMPELDIL
NYRNGLLLKAVGALINQTNSKGEFFPINDAQKGMSLASRELVYAVSMAYYYGGNDTGLLS
IIKGQNRVPLNDSGLAAAKAIEEGKAKKYVYKSIELSDGASGNEGGIGILRSDDLTLVMK
YAKHGMGHGHFDRLGFLLYDETGEVIQDYGSARWVNIEHKDGGGYLKENHSWAKETIAHN
TLVINKDSHFNGNVKEADKTSGTPYYFTVDSQVQIVSAQEINAYKNIEMQRTMAMVGIKE
LEKPLVIDLFSVQAPEGSRYDLPLYYIGEFMSSNQKFKANNNLIPMGKESGYQHLWAEAQ
VDVNGGIYNMTWFNKKKFYSVTSTIESGDTMILARIGANDPNFNLRRDPSVIHRRTAGNT
LFANLYEIHGGYDYSSERPLNLFSSIANLKVIYQSSEFVVIQFQLKSGEEYQFSFSLKDN
NETNMHSVESSTGKVEWQGTYDFKTINN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaagagattatcacccatattaatagtattcatattcttggcctgtaatgaaaaggta
aataaggattctataaaagaacatccaaatttaattttaactattaaagcggtaaattca
atgcgtgccagtcttggggaaatttctctttttgaccagtcagtagaggaaattcgtgct
caagttgatgctgagattgaatttggaattgaggttcctattcctaaagatttagcagga
ggttatactcatgaaagacataaaactaacttttttacaatgcaaaaggctggtgtactt
tttcaaatcacagcagaggaaaagtatgcaatctatatccgagatatgcttttaaaatat
gcagaaatgtggccaactatcggtaaacatccagcagagaaatcatatgcacgtggtaag
ctattttggcaatgcttgaatgatgccaactggttggtttataccagtcaaggatatgat
tgtatttacgattggcttgatgggcaaacaagagagaagttaaataaagaattattccga
ccatatgcagaatatatatctgtcgaaaatcctcaattctttaatcgtattcataatcac
agtacttggggaaatgctgctgtaggaatgattggtttagttataggtgataaagaactg
gtaaactggtctctttatggattggatattgaagtaccgggagatattgtaaaagataat
gatggtggtactatacaaatagatggtcaaaaagaggctggattccttgcccaaattgat
cactcattttcacctgatgggtattatactgagggaccttattatcaacgatatgcaata
tatccatttcttgtttttgcacaagggttagctaataagatgcctgaactcgatatccta
aattatagaaatggtcttttactaaaagctgttggtgctttaattaatcaaacaaattct
aaaggagaattctttcctataaatgatgcacaaaaaggaatgtccttggcgtctagagaa
cttgtatatgctgtaagtatggcatactactacggaggaaatgatacaggattactttct
ataataaaaggacaaaacagagttcccttaaacgattctggtcttgctgctgcaaaagca
attgaagaaggaaaagcaaagaagtatgtgtataaaagcatagagctctcagatggagca
tctggtaatgaaggaggtattggaattctacgttctgatgatttgactttggttatgaaa
tatgccaagcatggtatgggacatggccactttgataggttgggctttttactttatgat
gagacgggtgaagtaattcaggactatgggtctgcacgttgggtaaatattgaacataaa
gatggtggtggatacttaaaagaaaatcatagctgggctaaagaaactatagcacacaac
accttagtgataaataaagattctcattttaatggcaatgtaaaggaagcagataaaact
tcgggaactccatattattttacagttgatagtcaagttcaaatagtaagtgcacaagaa
ataaatgcatataaaaatatagaaatgcagcgtactatggctatggtgggtattaaggag
ttagaaaagcctctagtaatagatttattttcagtacaagctccagaaggttcaagatat
gatttaccactatactatatcggtgaatttatgtcttcaaaccagaagtttaaagcgaac
aataatcttattccaatgggaaaagagtcaggataccagcatttatgggcagaagctcaa
gtagatgttaatggaggtatttataatatgacgtggtttaataagaagaaattttattct
gttacttccactattgaatcaggagatacaatgattttggctaggattggagccaacgat
cctaattttaatcttcgaagagaccctagtgttattcataggagaactgctggcaataca
ctttttgctaatctttatgaaatacatgggggctatgattattcttctgagcgtccattg
aatttattctcatcaattgccaatttgaaagtgatctaccaatcatcagagtttgttgtg
attcaatttcaattaaagagtggagaggaatatcagttttccttttcattgaaggataat
aatgagacaaatatgcattcagttgagtcgtcaactggaaaagtagaatggcaggggact
tatgattttaaaactataaataattaa
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