Chondrinema litorale: OQ292_37455
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Entry
OQ292_37455 CDS
T09098
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clit03000
]
OQ292_37455
Transcription factors [BR:
clit03000
]
Prokaryotic type
Helix-turn-helix
IclR family
OQ292_37455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
DnaD_N
Rrf2
HTH_27
FeoC
MarR
HTH_24
Fe_dep_repress
TrmB
Motif
Other DBs
NCBI-ProteinID:
UZR99554
LinkDB
All DBs
Position
unnamed18:84519..85271
Genome browser
AA seq
250 aa
AA seq
DB search
MIQAIHRAFDVLEFIAAQEQEWVQLKDIANHLNLNHSTCANLVKTMVVRGYIEKAENQRG
YKIGPILKSFSGDSMEQKMQRIVNMAKEPMQILADKLHEGAILTVLSGGKRLIIHEVKKD
QELQVINLKEKPVYDSSTGRALVAALNDEELEAFINKYGLPEYEVWPEVEDKEDLMYELN
KIRKRGYAQQTSKAHVVGFAVNIVCLGLHASLGVYLPEIRLKDINYQEEILNLLNKTADK
ITETTNQPNI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgattcaagctatacatagagcatttgatgtactggaatttatcgctgcacaggaacag
gagtgggtgcagttaaaagatattgccaaccatcttaacttaaaccatagtacttgtgca
aatctcgtgaaaacaatggtagttagagggtatatcgaaaaagctgaaaaccaacgtggc
tataaaattggtccaatattaaagtcttttagtggagatagtatggagcaaaagatgcaa
cgaattgtaaatatggctaaagaaccaatgcaaatacttgcagataaactacacgaaggt
gcgatactaactgtgctgagtggaggaaaaagattaattattcacgaagtaaaaaaggat
caggaattacaagtaattaatttaaaagaaaaaccagtttatgattcttcaacaggaaga
gcattagtagcggcattaaacgatgaggagctagaagcttttataaataaatatggctta
cccgaatatgaagtatggccagaagttgaagataaagaagatttaatgtatgaactgaat
aagataagaaaacggggttatgctcaacaaactagtaaagcacatgttgtcggttttgct
gtaaatatcgtttgcttaggcttacatgcatctctcggtgtgtatttaccagaaatcaga
ttaaaagatatcaactatcaggaggaaatattgaatctactcaacaaaactgctgataaa
ataacagaaacaacaaatcaacctaatatatga
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