Clostridium sp. MD294: C820_000339
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Entry
C820_000339 CDS
T10174
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
clod Clostridium sp. MD294
Pathway
clod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C820_000339 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clod03400
]
C820_000339 (nth)
Enzymes [BR:
clod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C820_000339 (nth)
DNA repair and recombination proteins [BR:
clod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C820_000339 (nth)
Prokaryotic type
C820_000339 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_2
SWIRM-assoc_3
Motif
Other DBs
NCBI-ProteinID:
USF28956
UniProt:
N1ZAR6
LinkDB
All DBs
Position
complement(341871..342491)
Genome browser
AA seq
206 aa
AA seq
DB search
MEEKINAILTLLDEHYGIVKCHLNYQTDWQLLIATILSAQCTDDRVNEVTKVLFQKYATL
KDFAEADLEELKQDIHSIGFYNNKARNIISCCQRLLTVYGGVVPSNIEELITLAGVGRKT
ANVVRGNIYNIPSVVVDTHVKRVSNLLGLTENTDPAKIEQDLMKILPQDHWIRYNTQIIT
HGRKICIARRPKCQECFLYNYCDNRK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaaataaatgcaatattaacacttttagatgaacattatggcattgtaaaa
tgccatttaaattatcaaacagattggcagctactcattgctacaatattaagtgcacaa
tgtacagatgatagagtaaatgaagtaacaaaagtattatttcaaaaatatgctacatta
aaggactttgctgaggcagatttagaagagctaaaacaagatattcattctataggattt
tataataataaagcaagaaatattatttcgtgttgtcaaaggcttttgacggtatatggt
ggtgttgtgccaagtaatatagaagaactgattacattagcaggagtaggaagaaaaaca
gcaaatgtagtaagaggaaatatttataatattcctagtgtagtggtagatacccatgtc
aaaagagtttctaatcttttagggttaacagaaaacaccgaccctgccaaaatagaacag
gatttaatgaaaattttgcctcaagaccattggataagatataatacacagattattaca
catggcagaaaaatatgtattgcaaggcgtccgaaatgtcaagaatgttttttatataac
tattgtgataacagaaaataa
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