Clostridium sp. MF28: AXY43_22690
Help
Entry
AXY43_22690 CDS
T11014
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
clom Clostridium sp. MF28
Pathway
clom00300
Lysine biosynthesis
clom00550
Peptidoglycan biosynthesis
clom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AXY43_22690
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXY43_22690
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clom01011
]
AXY43_22690
Enzymes [BR:
clom01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AXY43_22690
Peptidoglycan biosynthesis and degradation proteins [BR:
clom01011
]
Precursor biosynthesis
Amino acid ligase
AXY43_22690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Lambda_Kil
Motif
Other DBs
NCBI-ProteinID:
AVK50592
LinkDB
All DBs
Position
5226807..5228267
Genome browser
AA seq
486 aa
AA seq
DB search
MNLKSILKGIDYESIQGDIDIEVNKINYDSRKAGNDDVFVCVKGYATDGHKYIEKAIENG
AKVIVIQDDIEIKDENITIIKCNDTRKALALMGANYYDNPSSKMKIIGVTGTNGKTTTAF
MIKHILEESNKKVGLIGTIANFIGDEKIHTERTTPESLELQELFSEMVDKGVEYCVMEVS
SHSLALDRVYGIEFQVGIFTNLTRDHLDFHKTFENYYKAKFKLFERSRIKIVNVDDNYGR
QVISDLNNLKCDDIYSFSVKSISDFKAFDEEMGSKEIKFKLNLKEDEQFVLNIPGEYNIY
NALGAIAACFKLGMPIKDIKSGIENVVVLGRCERVAKEYNLGYEIIIDYAHTPDGLENIL
KTAKAFTKGRLISVFGCGGDRDKVKRPEMGKISTDIADITIVTSDNPRSEEPLSIIKDIE
SGIDKDNYFVIENRKEAIKKSIDIALDNDVIVIAGKGHETYQVLKDETIHFDEREIVKEI
LDNMNN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaaaagtattttaaaaggaatagattatgaatcaattcagggtgatattgat
attgaagttaacaaaataaactatgatagcagaaaagctggcaatgatgatgtttttgtc
tgtgtaaaaggatatgcaactgatggccataaatatatagaaaaagctattgaaaacgga
gcaaaagttatagtaatccaagatgatatagaaataaaggatgagaatattaccattatt
aaatgcaatgatacaagaaaagcattggcattaatgggagcaaattattatgataatcct
agttctaaaatgaagataattggagttactggaactaatgggaaaactactacagctttt
atgattaagcatattttagaagaaagtaataaaaaagttggtcttatcggaactattgca
aattttataggtgatgaaaaaattcatactgaaagaacaactccagaatccttagagctt
caagaattattttctgaaatggttgataaaggtgtagagtattgtgttatggaagtgtct
tcccattcattagcattagatagagtttatggtattgaatttcaggttggaatatttact
aatttgactagagatcatttggattttcacaagacttttgaaaattattataaggcaaag
tttaaattgtttgaaagatctagaataaaaattgttaatgttgacgataattacgggaga
caagtaattagtgatttaaacaatttaaaatgtgatgatatatattcattctcagtaaaa
agcatttcagattttaaagcttttgatgaagaaatgggaagtaaagaaatcaaatttaaa
ctcaacttgaaagaagatgagcaatttgttttaaatataccaggtgaatataatatatat
aatgcgttaggtgcaatagcagcgtgttttaaattaggtatgcctataaaggatataaaa
agcggcattgaaaatgtagtagttttgggaagatgtgaaagagtagcaaaagaatataat
ttaggttatgaaatcatcatagattatgcacatactccagatggtttagaaaatatatta
aagacagctaaggcatttacaaaaggaagattgatatctgtatttggttgtgggggagac
agggataaggtaaaaaggcctgaaatgggtaaaatatctacagatattgcagacattaca
attgtgacatcagataaccctagaagtgaggaacctctaagtataataaaagatattgaa
tctggaattgataaggataattattttgtaatagaaaatagaaaagaagcaataaaaaaa
tctatagatatagctctagataatgacgtaatagttattgcgggtaagggtcatgaaact
taccaagtattgaaagatgaaactatacattttgatgaaagagaaattgtaaaagaaata
ttagataacatgaacaattag
DBGET
integrated database retrieval system
