Condylostylus longicornis: 129619043
Help
Entry
129619043 CDS
T09756
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
clon
Condylostylus longicornis
Pathway
clon03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129619043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clon03400
]
129619043
Enzymes [BR:
clon01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
129619043
DNA repair and recombination proteins [BR:
clon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129619043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT
DNA_ligase_IV
BRCT_2
DUF2018
DUF816
Motif
Other DBs
NCBI-GeneID:
129619043
NCBI-ProteinID:
XP_055390092
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MKEISEIIKYSDLVNLLEKIQNSKDIRQKENCLKKFIENFNKIKQESHLTGSDSTFYCVL
RILLPNTDGRTYGIKTTTMGKIYVKILGLAPNGEDAKKLTYKNENQSYEGDFANIAFNVL
KSRPNNGSNFSLKQLHDLLDVIVNNNRQVVESELTKFFEIATAMEQKWFIRILFKRLHLG
IGEQKIFSIYNNKARPLYMKLTNLYKVCDIIESGKHFDLDKVEVELFQHIKAMLCQKIQP
TKFKQIFEQSAFYYLETKMDGERFQIHMKNGTFKYLSRNGIDYTKNFGENINAGSLTCNI
KNLLNSSVESIILDGEMMVWSKTKQSFCVKGENYDVKHLKSGGDLNPCFVVFDILYLNNE
SFLEKPYFERIRKIHEILKVQKGILQLCHKDKVNSLEEFIEKFNEAMNANEEGIVLKHPS
SIYKPGIRGDGWYKLKPDYVDDVIADLCFIIMGVTFDRSKNYINSYLLGALNKNEEEPCA
SKIYSVATVNSGLSNVEKEQLNNRIKEHLVKEKPENFVIGKLEADSWLPLKNTVLLDVTA
TELSKSEDFKTDFTLRFPRILSIRTDKVWLESTSIQELCNETEENERVKKIYKRNLDAKD
FAPAKKIKLLLENPYKSNFIPDNVQRLSSIFENFEFCVLSGSVDGKYSIEDLKKIVVQHG
GKVVENPTVRKSCICIAGKMGFRAKKISETGQHNIIKYSWLIDNFSNRSNIKFCRPKPRD
IIFATEETESKQVKYFDKYGDSYTDHVDNKELKILFDDIENPPLLSYNEIENLKTELDSC
WLKNKLI
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagatttcagaaataataaaatacagtgatcttgtaaacttgctagaaaaaatt
caaaactcaaaagatatccgtcaaaaagaaaattgtttaaagaaatttatcgaaaatttt
aataagattaaacaagaatctcatttaacaggttctgattctacattttactgtgtgtta
cgaattttacttccaaacacagatggaagaacctatggcataaaaaccacaacaatgggc
aaaatttatgttaagattcttggtttggcaccaaatggggaagatgccaaaaagttaact
tataaaaacgaaaatcaatcttatgaaggagatttcgcaaacatagcttttaacgtttta
aaaagtagaccaaataatggcagtaatttttcattgaaacaattacatgatcttcttgat
gtaatagtaaataataaccggcaagtcgttgaaagtgaattgaccaaatttttcgaaatt
gccactgctatggaacaaaaatggtttataagaattttatttaaaaggcttcatttagga
attggtgaacaaaaaatattttcaatttataataataaagcaagacctctgtacatgaaa
ttgacaaatttgtataaagtttgtgatatcatagaatcaggaaaacattttgatcttgat
aaagtagaagtcgaattatttcaacatattaaagccatgttatgccaaaaaatacaacca
acaaaattcaaacaaatttttgaacaaagtgccttttattatttagaaacaaaaatggat
ggtgaaagatttcaaatacatatgaaaaatggtacattcaaatatttatcaagaaatggc
atagactacacaaaaaatttcggtgaaaatatcaatgctggttctcttacatgtaatatt
aaaaatttattaaactcttcggtagaatcaattatactggatggtgaaatgatggtgtgg
agtaaaactaaacaaagcttttgtgttaaaggtgaaaactatgatgttaagcatttgaaa
tctggtggggatcttaatccttgttttgttgtatttgatatattatatttaaataatgaa
tcattcttggaaaaaccttattttgaaagaataagaaaaattcacgaaattttgaaagta
caaaaaggaattttacagctttgtcataaagataaagttaacagtttggaagaatttata
gaaaaatttaatgaagctatgaatgcaaatgaagagggcatagtactaaagcatccatca
tcaatttataaaccaggaataagaggcgatggatggtataaacttaaacctgactatgtt
gatgatgttatagcagatctttgttttattattatgggcgtaacttttgatcgttcgaaa
aattacattaatagttatttactaggtgccttaaataaaaatgaagaagaaccatgtgca
tcaaaaatatattccgttgcaaccgttaattctggactatcaaatgtagaaaaggagcaa
ctaaataatagaataaaagaacatttggtaaaagaaaagcctgaaaactttgtgattgga
aagctagaagcagattcttggttgcctctaaaaaatactgttttattggatgtaacagca
acagaattaagcaaaagtgaagattttaaaacagacttcacattaagatttccgagaata
ctatcaataagaacagataaagtttggttagaatcaacatccattcaagaattgtgtaat
gaaactgaagaaaatgagagggttaagaaaatatataaacgtaatcttgatgctaaagat
tttgctccagcgaaaaaaataaaacttcttttggaaaatccttacaaatctaattttatt
cccgataatgtacaacgattatcttcaatttttgaaaattttgaattttgcgtcttatca
ggttcagttgatggcaaatattcaattgaagatttgaaaaaaattgtggtacaacatggt
ggcaaggttgttgaaaatccaactgtacgtaaaagttgtatatgcattgcaggaaaaatg
ggatttcgagcaaaaaaaattagtgaaacaggtcaacataacattattaaatatagttgg
ctaattgacaatttctcaaatagaagtaatataaaattttgccgtccaaaaccgagagac
atcatttttgcaacagaagaaacagaatcaaagcaagtaaaatatttcgacaaatatgga
gattcatatacagatcatgttgacaataaagaattaaaaattctgtttgatgacattgaa
aatccccctctcttatcatataatgaaatagaaaatttgaaaactgaactagatagctgt
tggctaaaaaataaacttatataa
DBGET
integrated database retrieval system
