Clostridium sp. AWRP: DMR38_03650
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Entry
DMR38_03650 CDS
T07742
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
clos
Clostridium sp. AWRP
Pathway
clos01501
beta-Lactam resistance
clos01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DMR38_03650
01503 Cationic antimicrobial peptide (CAMP) resistance
DMR38_03650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clos03036
]
DMR38_03650
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clos02000
]
DMR38_03650
01504 Antimicrobial resistance genes [BR:
clos01504
]
DMR38_03650
Chromosome and associated proteins [BR:
clos03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DMR38_03650
Transporters [BR:
clos02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DMR38_03650
Antimicrobial resistance genes [BR:
clos01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DMR38_03650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_YBHG
YknX_C
Biotin_lipoyl
PTS_EIIA_1
RND-MFP_C
HH_MFP_RND
BSH_RND
CzcB_C
BSH_CzcB
BSH_YknX
BSH_LcnD
Enterotoxin_b
ThiS-like
TraL_transposon
CC_Liprin_beta
HH_EMRA
KIF9
Motif
Other DBs
NCBI-ProteinID:
AZV55760
LinkDB
All DBs
Position
808886..810166
Genome browser
AA seq
426 aa
AA seq
DB search
MRKFIYKFKYICSAVKKLSKKRKMVCICLAVVTIAVLSTYFIIGGKSDEEKMYTRNYPVK
TLEIKSGSYPMSLQYQGLTGGSEVRKLSFKSSAKIFKVYVSKGQHVKKGDKLVDLDKSDL
NFAAQAAKSQVDAASAQYNKSVNGAQQEDVSKAQIAVKNSQDSNNYYKDLYDKYCKLSDA
GAISKQELDDVKLQLDNSQNALNSAQQSLEQVKNGSRDEDKKSLLAQLNEAKANYDSKEN
LIQDASMAADQNGYVVDILGKEGEMQQAGDPVVLFRSENEVITVGLSDDDVKKVKVGTNA
KVKIGDDSAEGQIINVVQMADSKSGTYSAEIKLLKPIDNNKYYIGETAAVYIDMGDKNAI
SIPISSVLNDGEDYVYVIENGHAVKKNITLGDTDEDRVSVDGLKSGDELVVQGMKSLKSG
YKVTVK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatttatatataaatttaagtatatttgttcagcagtaaaaaaattaagtaaa
aaaaggaaaatggtctgcatctgcttggctgttgtgactatagcagtattaagcacatat
tttataattggcggaaaatctgatgaggaaaaaatgtatacgaggaattatccagtaaaa
actttagaaattaagagtggtagttatcctatgtcactgcaatatcaggggctaactgga
ggtagtgaagttagaaaattatcttttaagagttcagctaaaatttttaaagtatatgta
tctaaaggtcagcatgtaaaaaaaggtgataagttggtggatcttgataaaagtgatctt
aattttgcagcacaagctgctaaatctcaagttgatgctgcttctgcacagtataataag
tcggtaaatggtgcgcagcaggaagatgtaagtaaagcacagatagcagttaaaaattca
caagatagtaataattattataaagatttgtatgataaatactgtaaattaagtgatgca
ggggccatttcgaaacaagaattagatgatgtcaagttacaattagacaattctcaaaat
gcattaaacagtgcacagcagagtcttgaacaagtgaaaaatggttccagagatgaggat
aaaaagtcactgttagcacaattaaatgaagcaaaagcaaattacgattcaaaagaaaat
ttaattcaagatgcatctatggcagcagaccaaaatggatatgtggtagatatactgggc
aaagaaggagaaatgcagcaggcaggagacccggtagttttgtttagaagtgaaaatgaa
gtcattacagttggactttcagatgatgatgtaaagaaagtaaaagttggtacaaatgca
aaggttaagataggggatgacagtgctgaagggcaaatcataaatgtagttcaaatggct
gacagtaagtctggaacatatagtgcagaaattaaacttttaaaaccaatagataataat
aaatattatataggagaaacagcagcagtttatatagatatgggagataagaatgcaata
tctattccaattagttccgttttaaacgatggtgaagattatgtttatgtgattgaaaat
ggacatgctgttaagaaaaatataactttaggtgatactgatgaagatagagtttcagtg
gacggtttaaaaagtggagatgaactcgtagttcaaggaatgaaaagcctaaaatcagga
tataaagttacggttaaataa
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