Clostridium sp. AWRP: DMR38_12080
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Entry
DMR38_12080 CDS
T07742
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
clos
Clostridium sp. AWRP
Pathway
clos01501
beta-Lactam resistance
clos01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DMR38_12080
01503 Cationic antimicrobial peptide (CAMP) resistance
DMR38_12080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clos02000
]
DMR38_12080
01504 Antimicrobial resistance genes [BR:
clos01504
]
DMR38_12080
Transporters [BR:
clos02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DMR38_12080
Antimicrobial resistance genes [BR:
clos01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DMR38_12080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
COXG
LPD29
Coa3_cc
Motif
Other DBs
NCBI-ProteinID:
AZV57283
LinkDB
All DBs
Position
complement(2635486..2638626)
Genome browser
AA seq
1046 aa
AA seq
DB search
MNLTELSVKKPAAITMVILFLLGLGIFGYTHLGADLMPSMDIPVISISTTYSGASSEDIR
KDVVKPMEDAVAGISGIDRINSTAREGMGQTTIIFKSSANMNTAFLDVQKAVDNAQGKLP
KNADKPILFKLDTGAMSALMLSVSGNLSYDELYNEANNITEALKKVQGVGNVSLEGIQKK
QLIIKLNKSAVEFYGINLNTLTSKLQSDNINMPAGQIKQDKLNQSVRVISKFESVDEVKN
LLIPTSGNATVRLGDIADINLEYPEEDQRTRMNGKNTIGISIQKQSDANVVEVVNNVKKE
IAGLKKDMPSNIRLDTAYDSTTFINSSISQIKHTLIEGVITTALVLLIFLKSWRSSLVIL
VAIPTSLIATFFMMYVMKFTMNIMSLMGLSLCVGTLVDDSIVVLDNIQRHLAMKKDPQSA
AIDGRKEIGLASIAITLCDVVVYLPVCFMTGMVGTYFREFGLTIVFASLFSLFVAFTITP
MLASRLLKTEENRQAKSGMLKSKFKRSIFYRILNGISNSMDNITANYKRFLIWCLDHRKR
VLAISAVVLVATIALIPIGAIGTELMPTTDESNFSISMNFDSGTSLNEMDKKVKQVENYL
HSVPEVSTYYSMVGSMSGSVMMDSSSNSATMYVTLYPKNDRKRSQTEVAKQVRKWGNATL
AGTDFSVSESEAGGSGSSKPISIEILGNNTDTVTEISNKVEQIIKGIPGITDVGNSTNAS
QSELRIKIDKLAAAQYGVSISDISSTLRTAIQGSSAGTYSTSDDDYDIKVKFHDGDIKTP
SDISGIKVLSQSGQSIPISEVASIVRTNSPQSISRKDRQDVATVSANIEGRSLGTISQQI
GEKLKSLSVPEGYKIQFGGDQKSMGDSFTSLGEALGVSLILIYMILVVLYESFLTPFIRM
LSLPCALVGAFGILAITGKTLNMMSLIGLIMLDGLASKNGTLLIDYTNTLIKRGYSLREA
LIESGERRLRPIMMTSLTMIVGMLPAALSIGEGSELKSSMAVLVIGGMIASTIFTPIILP
IIYLMMDNLKNRIFKKRKKQPEMQEV
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaactgaactatctgtaaaaaagccagctgcaataaccatggttatattgttt
ttgctagggcttggtatatttggatatacacatcttggcgcagatcttatgccttctatg
gacataccagtaatttctatatcaactacttattctggtgccagttcagaagacataaga
aaggatgtcgtaaaacctatggaggatgcagttgcaggcataagcggcattgatagaatt
aattctacagctagagaaggaatgggacaaactactataatattcaaatctagcgcaaat
atgaatacagcctttctagatgtacaaaaagctgtagataatgcacaaggtaaacttcct
aaaaatgcagataagcctattttatttaagctagatacaggtgctatgtctgctttaatg
ttatccgtatctggaaacttatcttatgatgaactttacaatgaggcaaataatataact
gaggctctaaaaaaagttcaaggtgtaggaaatgtatctcttgaaggaatacaaaaaaag
cagctgataataaaattaaataaatctgcggtagaattttatggtataaatttaaatact
ttaacttctaagctgcagtcagataatataaatatgcctgcaggccagataaagcaggac
aaattaaatcaatctgtaagagttataagtaaatttgaaagtgtagatgaagtaaaaaat
ttgctcataccgacttcaggaaatgctactgttcgtttaggagatatagcagatataaac
ttagaatatcctgaagaagatcaacgtactagaatgaatggaaaaaatactataggaata
agtatacaaaagcaaagtgatgcaaatgtagttgaagttgtaaacaatgttaaaaaggaa
attgccgggttaaaaaaagatatgccatctaatattagattggatacagcatatgacagt
actacgtttataaattcttctatttctcaaataaagcatactttaatagaaggtgtaata
acaactgctctagttttactaatattcttaaaaagctggagatcttcacttgtaatactt
gtagccataccaacgtctcttattgcaactttctttatgatgtatgttatgaaatttact
atgaatataatgtctcttatgggattatctctttgtgtaggtactcttgtagatgactcg
attgttgtactagataacatacagcggcatctggctatgaaaaaagatccacaatctgca
gctatagatggacgtaaagaaataggacttgcatctattgccataactctttgtgatgta
gttgtatatcttcctgtttgctttatgacaggtatggtaggaacttactttagggagttc
gggcttactatagtttttgcctcgctattttccttatttgtagcatttactataactcct
atgctggcatcaagacttcttaaaacagaagaaaatagacaagcaaaatcaggaatgtta
aaaagtaaatttaaacgaagcatattttatagaatacttaatggaatttcaaattctatg
gataatataacagctaactataaaagatttcttatatggtgtctggatcatagaaaaagg
gtacttgccataagtgcagtggtattagtagcgactattgcattgatacctataggtgct
ataggaacagaacttatgccaactacagacgagagtaattttagtataagcatgaatttt
gattctggaaccagtttaaatgaaatggacaagaaagttaaacaagtagaaaactattta
catagtgtacctgaagttagtacatattattccatggtagggtctatgagtggcagcgta
atgatggatagttcttcaaattctgcaactatgtatgtaactctttatcctaaaaatgat
agaaaaagatctcaaactgaagtggcaaaacaagttagaaaatggggaaatgcaacttta
gccggaacagatttctctgtgagtgaatccgaagctggaggatcaggttcaagtaagcct
atatctattgaaatattaggaaataatacggacactgtaactgaaatatcaaataaggta
gagcaaataataaaaggtattccgggaattacagatgtaggtaattctacaaatgcaagt
caaagcgaacttagaattaaaatagacaagttagcagcagcacaatatggtgtatccata
tcagatatatcatctacacttaggacagcaattcaaggttcttctgctgggacatatagt
actagtgatgatgattatgatataaaagtgaaatttcacgatggtgacataaaaactcct
tcagatataagtggaataaaagtgttaagtcaatctggacaatctataccaataagtgaa
gttgcatctatagtaagaactaatagcccgcaatctatatccagaaaggatagacaggat
gtagctacagtttctgcaaatattgaaggaaggtctcttggaactataagtcagcagata
ggtgaaaaattaaagtcactatctgtaccagaaggttataaaattcaatttggtggggat
cagaagagtatgggagacagttttacttctcttggagaagcactgggagtatcattaata
cttatttacatgatacttgttgtactttacgaatccttcttaacaccatttataagaatg
ttgtcactgccttgtgcacttgttggagcttttggaatacttgctattacgggtaaaact
ttaaatatgatgtccttaataggacttataatgcttgatggattagcttctaaaaatggt
actttattgattgattatactaatactctcataaaacgtggatatagtttaagagaagca
ttaattgagtctggtgaaagaagattaagacctataatgatgacttctttaactatgatt
gtgggcatgctgccagcagctttatctataggtgaaggcagtgaattgaaatcaagtatg
gctgtcttagttattggaggaatgattgcatcaactatttttactcctataatattacct
ataatttacttgatgatggacaatttgaagaatcgtatatttaaaaaaagaaaaaaacag
ccagaaatgcaggaggtgtaa
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