Clostridium sp. AWRP: DMR38_19580
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Entry
DMR38_19580 CDS
T07742
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
clos
Clostridium sp. AWRP
Pathway
clos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DMR38_19580 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clos03400
]
DMR38_19580 (nth)
Enzymes [BR:
clos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DMR38_19580 (nth)
DNA repair and recombination proteins [BR:
clos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DMR38_19580 (nth)
Prokaryotic type
DMR38_19580 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
LPD29
Zn_peptidase_2
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AZV58607
UniProt:
A0A3T0M173
LinkDB
All DBs
Position
complement(4192712..4193356)
Genome browser
AA seq
214 aa
AA seq
DB search
MDKQNVDNILKVLKETYPEAKCALNFESPYELLVSTMLSAQCTDVRVNKVTSELYKQYNT
PEKMISLTEEELGERIKSCGFFRNKSKNILSTSRELIEKYGGEVPHTMEQLIELPGVGRK
TADVVLSNAFGVPAIAVDTHVFRVSNRLGIAKGTTPHKVEMELMKNIPKSMWSDSHHYLI
WHGRRICKSRKPDCEHCPLAPYCEYFNHPEETKS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
ttggataaacaaaatgtagataatatattgaaagtactgaaagaaacttatccagaagca
aaatgtgcattgaatttcgagtctccttatgaattgttagtgtccactatgctttcagct
caatgcactgatgtaagagtaaataaagttacatcagaattgtataaacaatataatact
cctgaaaaaatgatatctctaacagaggaagaattaggagaaaggataaaaagctgcggc
ttttttagaaataaaagcaagaatatactttcaactagcagagaacttattgaaaagtac
ggtggagaggtaccacatactatggaacagttgatagaacttccaggagtgggcagaaaa
actgcggatgttgttttgtcaaacgcctttggagttccagcaattgcagtggatacccat
gtatttagggtatcaaatagacttggaattgcaaaaggaactactcctcacaaggtagaa
atggaacttatgaaaaatatacccaaaagtatgtggagtgattcacatcattatttaata
tggcacggaaggcgtatatgtaagtcaagaaaacctgattgtgaacattgccctctagca
ccttactgtgaatatttcaatcatccagaggaaactaaatcttga
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