Campylobacter lari RM16701: UPTC16701_0252
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Entry
UPTC16701_0252 CDS
T03550
Symbol
ispDF
Name
(GenBank) bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
clr
Campylobacter lari RM16701
Pathway
clr00900
Terpenoid backbone biosynthesis
clr01100
Metabolic pathways
clr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
UPTC16701_0252 (ispDF)
Enzymes [BR:
clr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
UPTC16701_0252 (ispDF)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
UPTC16701_0252 (ispDF)
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Gene cluster
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Motif
Pfam:
YgbB
IspD
NTP_transf_3
DUF4322
Arg_tRNA_synt_N
Motif
Other DBs
NCBI-ProteinID:
AJD04322
LinkDB
All DBs
Position
complement(218847..219962)
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AA seq
371 aa
AA seq
DB search
MLDISLIMLSAGESSRFNAPVKKQFLRLGEQPLWLYATKNLSSFYPFKQIVVTSGNISYM
KKFAPEYKFVQGGATRAQSLLNALSMVESEYVLVSDVARVLISKNLFNNIIENYDKADCI
TPVLKVSDTTIYAQEAIDRDKIKLIQTPQLSRTSMLKKALEQSSNFTDDSTAIQAIGGKI
WYVQGDELAKKITFKEDLKSLNLPKPSWDIFNGNGFDVHEFGEQRALLLGGVKVHESMGL
KAHSDGDVLAHALIDALLGAAGLGDIGELFPDNDMQYKNADSMLLLQNAYTLVQNYGFEL
VNADITIIAQTPKMKDFKEAITFNIAKTLKTTPNKINIKATTTEHLGFVGRKEGIAVLAS
VNLKYFDWMKL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgttagatatttccttgattatgctatctgcgggagaatcatcaagatttaatgctccg
gtaaaaaagcagtttttacgactaggcgaacaacctttatggctttatgctactaaaaat
ttaagttctttttatccttttaaacaaatagttgttacttctggtaatatttcttatatg
aaaaaatttgcccctgaatataaatttgttcaaggtggcgcaactagagcacaatcttta
ctcaatgctttaagcatggttgagagtgaatatgttttggttagtgatgttgcaagagtt
ttgatttctaaaaatctttttaataatatcatagaaaattatgacaaagctgattgtatt
acacctgttttaaaagtaagtgatactacaatttatgctcaagaagctatcgatagagat
aaaatcaaactcatacaaacccctcaactttcacgcacgagtatgctaaaaaaagcttta
gagcaaagttcaaatttcaccgatgatagtacagctatacaagctattggtggtaaaatt
tggtatgtgcaaggtgatgagttagctaaaaaaattacctttaaagaagatttaaaaagc
ttaaacttaccaaaaccatcttgggatatttttaatggaaatggctttgatgtgcatgaa
tttggagagcaaagagctttgcttttaggtggggtaaaagtacatgaaagtatgggttta
aaagctcattctgatggagatgtattagctcatgcgctaattgatgcgcttttgggtgca
gcagggcttggagatattggcgaacttttcccagataatgatatgcagtataaaaatgct
gattctatgcttttattgcaaaatgcttatactttggtgcaaaattatggttttgaactt
gtaaatgctgatattaccatcatagctcaaacacctaaaatgaaagattttaaagaagct
attacttttaatatcgctaaaacattaaaaaccacaccaaataaaatcaatatcaaagcc
accaccacagaacatctaggatttgtaggaagaaaagaaggaattgcggttttagctagt
gtaaatttaaaatattttgattggatgaaattatga
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