Campylobacter lari RM16701: UPTC16701_0881
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Entry
UPTC16701_0881 CDS
T03550
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
clr
Campylobacter lari RM16701
Pathway
clr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UPTC16701_0881 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clr03400
]
UPTC16701_0881 (nth)
Enzymes [BR:
clr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
UPTC16701_0881 (nth)
DNA repair and recombination proteins [BR:
clr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UPTC16701_0881 (nth)
Prokaryotic type
UPTC16701_0881 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
Ogg-HhH
DUF2400
Motif
Other DBs
NCBI-ProteinID:
AJD04916
LinkDB
All DBs
Position
864832..865458
Genome browser
AA seq
208 aa
AA seq
DB search
MKRNLEIKKLFLEHFGQAKTELVFSNAYELIVCVMLSAQCTDKRVNLITPALFEAYPSVQ
DLAKANLSSLKLLINSCSFYNNKAQNLIKMAQAVCEQFNGEIPMNEQDLKTLAGVGQKTA
HVVMIEWCGANCMAVDTHVFRVSHRLNLSKAKTPEETEKDLTKIFKDNLNYLHQAMVLFG
RYTCKAKNPLCKECFLNHLCKSKDKKLI
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaatttagaaattaaaaaattatttttagagcattttggacaagcaaaaaca
gaattagtttttagtaatgcttatgaacttatagtttgtgttatgctttcagctcaatgt
actgataaaagggttaatctcatcacaccggctttatttgaagcttatcctagtgtgcaa
gatttggctaaggcaaacttatcatctttgaagcttttgattaattcttgctcattttac
aataataaagcacaaaatttaatcaaaatggctcaagcagtttgcgagcaatttaatggt
gaaatccctatgaatgagcaagatttaaaaactctagcaggagtaggacaaaaaactgca
catgtagtgatgatagaatggtgcggggctaattgtatggctgtagatactcatgtattt
agagtttcacacaggcttaatcttagcaaagccaaaacacctgaagaaactgaaaaagat
ttaactaaaatttttaaagataatctaaactatcttcatcaagctatggtgctttttgga
cgctatacatgcaaggctaaaaatcctttatgtaaagagtgttttttaaatcatttatgt
aagagtaaagataaaaagttaatctag
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