Clostridium bornimense: CM240_2504
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Entry
CM240_2504 CDS
T03165
Symbol
dacF
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
clt
Clostridium bornimense
Pathway
clt00550
Peptidoglycan biosynthesis
clt01100
Metabolic pathways
clt01502
Vancomycin resistance
clt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CM240_2504 (dacF)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CM240_2504 (dacF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CM240_2504 (dacF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clt01002
]
CM240_2504 (dacF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clt01011
]
CM240_2504 (dacF)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
clt01504
]
CM240_2504 (dacF)
Enzymes [BR:
clt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
CM240_2504 (dacF)
Peptidases and inhibitors [BR:
clt01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
CM240_2504 (dacF)
Peptidoglycan biosynthesis and degradation proteins [BR:
clt01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
CM240_2504 (dacF)
Antimicrobial resistance genes [BR:
clt01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
CM240_2504 (dacF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
VldE
SLC52_ribofla_tr
Motif
Other DBs
NCBI-ProteinID:
CDM69633
UniProt:
W6RYT7
LinkDB
All DBs
Position
rep1:complement(2717298..2718089)
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AA seq
263 aa
AA seq
DB search
MKKLKVKNKKRFTIFLALMLLAGSSTVVALEKNSISKPSTSSKELKESSEKVNSSDKTNN
KDNSNNEDIKKQLLDQYNYKDSNSIFVLVNKENKLEDGYIPTDLVEINYNLVNKPIQMRS
EAAEALNNMMVEGKANGLSLLLSSGYRSSDSQETLYSDEVATRGEGINYVAPPGTSEHET
GLAIDITSNKIGCKLEDIFDTTEEGQWLRDNAHRFGFILRYPKDKEEITGYLYEPWHFRY
VGVELATELYERGITLEEYYEGE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctgaaggtaaaaaataaaaagagatttacaatctttttagcacttatgtta
ttagcaggatctagtacggttgtagctttggagaaaaatagtattagtaaacctagtact
tctagcaaagaattaaaggaaagtagtgaaaaggtaaatagtagtgataaaaccaataat
aaagataattctaataatgaagatataaagaaacagttgttagatcagtataattataaa
gatagcaatagtatttttgtattagttaataaagagaataaattagaggatggatatata
ccaacagatttagttgagattaattataatttagtaaataaacctatacagatgagaagt
gaagcagcagaagcgttaaataatatgatggtagaaggtaaagctaatggattatcttta
ttgctttcatctggatatagaagcagtgatagtcaagaaactttatatagtgatgaggtg
gctactagaggtgaaggaattaattatgttgctccaccagggacatctgaacatgaaaca
ggattagcgatagatataactagtaataagataggatgtaaattagaagatatatttgat
actactgaagaaggacaatggcttagagataatgcacatagatttggatttatattaaga
tatcctaaggataaagaagaaatcacaggatatttatatgaaccatggcattttagatat
gtaggtgttgagttagcaactgaattatatgaaagaggaataacactagaagagtattat
gaaggagaatag
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