Canis lupus dingo (dingo): 112656039
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Entry
112656039 CDS
T08371
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X2
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112656039 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clud03400
]
112656039 (LIG4)
Enzymes [BR:
clud01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
112656039 (LIG4)
DNA repair and recombination proteins [BR:
clud03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112656039 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
112656039
NCBI-ProteinID:
XP_025297040
Ensembl:
ENSCAFG00020021230
LinkDB
All DBs
Position
22:complement(56990443..57112714)
Genome browser
AA seq
844 aa
AA seq
DB search
MRLILPQLERERMAYGIKETMLAKLYIELLNLPKEGKDALKLLNYRTPTGTRGDAGDFAT
IAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSARKKDLIKKSLLQLITQSSALEQKWLI
RMIVKDLKLGFSEQSVFSAFHNDAAELHNVTTDLEKVCRQLHDPSIGLSDISITLFSAFK
PMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGYNYTDQFGDSPR
EGSLTPFIHSAFKTDVQICILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSDLQTCYCVF
DVLMVNNKKLGRETLKKRYEILTSVFTPIPGRIEIVQKTQAHTKKEVIDALNEAIDKREE
GIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIVGGYWGKGSRGGMMSHFLCAV
AEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKALPSSILCGTEKPEV
YIEPCNSVIVQVKATEIVSSDMYKTGCTLRFPRIEKIREDKEWHECTTVDDLEQLRGKAS
GKLASKHLDIGGDDEPQEKKRKAAPKIKKIIGIIEHLKAPNLSNINKVSNIFEDVEFCVM
SGTDSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDVVKPEWLL
ECFKTKSCVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVDLDLNQLKEVFSGIKNSSKQ
TPREMASLIADLEYRYSWDRSPLCLFRHCIVYLDLYAVINDLSTKIEGTRLAITALELRF
HGAKVVSCLAQGVSHVIIGEDHSRVAVLKSFRRTLKRKFKILQQDWVTESIDKCELQEEN
QYLV
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgagacttattcttcctcagctagaaagagagagaatggcctatggaatcaaagaaact
atgcttgctaaactttatatcgaattgcttaatttacctaaagaaggaaaagacgccctt
aaacttttaaattacagaacacccactggaactcgtggagatgctggggactttgcaaca
attgcatattttgtgttgaaaccaagatgtttgcagaaaggaagtttaaccatacagcaa
gtaaatgacattttagactcaattgccagcaataattctgccagaaaaaaggacctaata
aagaaaagtcttcttcagctaataactcagagttcggcactggaacaaaagtggcttata
cggatgattgtaaaagacttaaaacttggttttagtgagcaatctgtattctctgctttc
cataatgatgctgccgagttgcataatgtcactacagatctggaaaaagtctgtaggcaa
ctgcatgatccttccataggactcagtgatatttctatcactttattctctgcctttaaa
cctatgctggctgctatagcagatattgagcgaatagagaaggacatgaaacaccagagt
ttctacattgaaaccaagctagatggtgagcgtatgcaaatgcacaaagacggggatgtg
tatcagtatttctcccgaaatggatataactatacggatcagttcggcgattctccacgg
gaaggttctcttacaccgttcattcacagtgcattcaaaacagatgtacagatctgtatc
ctggatggcgagatgatggccttcaaccctaatacacaaacttttatgcaaaaggggaat
aagtttgatatcaaaagaatggtggaggattctgatctgcaaacctgttattgtgttttt
gatgtactgatggttaataataaaaagctgggacgtgaaacgctgaaaaagaggtatgaa
attcttactagtgtttttacaccaataccaggtagaatagaaatagtgcaaaaaacacaa
gctcatactaagaaagaagtaatcgatgctttgaatgaagcaatagataaaagagaagag
ggaatcatgataaaacatcctctatctatttacaagccagacaaaagaggtgaaggatgg
ttaaaaattaagcctgagtacgtagatgggctgatggatgaactggacatcttaattgtt
gggggctattggggcaaaggttcacgaggtggaatgatgtctcattttttgtgtgctgta
gcagagaagcctcctcctggtgaaaaaccgtcagtgtttcatactctgtgccgtgttggt
tcaggttatactatgaaagaactgtatgatctgggtttaaaattggccaaacattggaag
cctttccataaaaaagctctaccaagcagcattttatgtggaacagagaagccagaggta
tacattgagccttgtaattctgtcattgttcaagttaaggcaacagagattgtctccagt
gatatgtataaaactggctgcacattgcgttttccacggattgaaaagataagggaagac
aaggagtggcatgaatgtactaccgtggatgacttagagcaacttcgagggaaagcgtct
ggaaagcttgcatctaaacaccttgacataggtggtgatgatgaaccacaagaaaagaag
cggaaagctgccccaaagattaagaaaattattggaattatcgagcacttgaaagcaccc
aacctttctaatataaataaggtttctaatatatttgaagatgtggagttttgtgttatg
agtggaacagacagccatccaaagcctgacctggagaacagaattgcagaatttggtggt
tatatagtacaaaacccaggcccagacacgtactgcgtgattgcaggatcggagaacatc
agagtgaaaaacatcatttcttcaaataaacatgatgttgtcaagcctgagtggctgtta
gagtgttttaagaccaaaagctgtgtgccgtggcagcctcgctttatgattcacatgtgc
ccatcgacaaaagaacattttgcccgtgaatatgattgttatggtgacagttattttgtt
gatctagatttgaaccaactgaaggaagtgttctcaggaattaaaaattctagcaaacaa
actccaagagaaatggcttctctgattgctgatttagaatatcggtattcctgggaccgc
tccccactctgtctgttccgacattgtattgtttatctggacttgtatgctgttattaat
gacttgagtaccaaaatcgagggaacgagattagcaattacagctttggagcttcgattt
catggagcaaaagtagtttcttgcttagctcagggagtgtctcatgtaatcattggggag
gatcatagtcgtgttgcagttttaaaatcttttcgaagaactcttaagagaaagtttaaa
atcctgcaacaagattgggtaactgagtccatagacaagtgtgagttgcaggaggaaaat
caatatttggtttaa
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