Canis lupus dingo (dingo): 112656215
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Entry
112656215 CDS
T08371
Symbol
PCDH15
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-15
KO
K16500
protocadherin-15
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
112656215 (PCDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clud03037
]
112656215 (PCDH15)
04515 Cell adhesion molecules [BR:
clud04515
]
112656215 (PCDH15)
Cilium and associated proteins [BR:
clud03037
]
Primary cilia and associated proteins
USH complex and associated proteins
112656215 (PCDH15)
Cell adhesion molecules [BR:
clud04515
]
Cadherins
Protocadherins
112656215 (PCDH15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Ig_Cad99C_N
Ig_CLSTN
Cadherin_FAT4_N
Cadherin_CELSR2_9th
CDH23_a-b
PRIMA1
Motif
Other DBs
NCBI-GeneID:
112656215
NCBI-ProteinID:
XP_035562549
Ensembl:
ENSCAFG00020026437
LinkDB
All DBs
Position
26
Genome browser
AA seq
1719 aa
AA seq
DB search
MLQQCYLWKWLASGIILGALFALCFGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNM
LIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQC
INKKVGTVIYHEVRIVVRDRNDNSPTFKHDSYYATVNELTPVGTTIFTGFSGDNGATDID
DGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYFVIIQANDRAQN
LNERRTTTTTLTVDILDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIIV
TPPIQAVDQDRNIQPPSDRPGILYSILVGTPEDYPRFFQMHPRTAELSLLEPVNRDFHQK
FDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATISDSLNL
TTPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFS
ITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYVYTDMSPGDSVIQLTAVDADEGP
NGEITYDILVGAQGDFAINRTSGLVTVAPGRALTVGRTYALTVQAADNAPPAERRHSICT
VYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRV
FNLSETTGILTLGKALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDVNDNAPVFDPY
LPRNLSVVEEEANAFVGQVRATDPDAGINGQVHYSLGNFNNLFRITSNGSIYTAVKLNRE
VRDSYQLVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLQ
IEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPEQEASITFLVEAFD
IYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPA
SRVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSA
TVKILVLHPGEIPRFTQEEYRPPPVSELATRGTMVGVISAAAINQSIVYSIVAGNEEDMF
GINNITGVIYVNAPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENDH
PPVFQKKFYIGGVSEDARMFTSVLRVKATDKDTGNYSAMAYRLIIPPIKEGKEGFVVETY
TGLIKTAMLFHNMRRSYFKFQVIATDNYGQGLSGKADVLVSVVNQLDMQVIVSNVPPTLV
EKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRA
IDRNELFKFLDGKLLDINKDFQPHYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLAL
AFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQSALPAAKPAAPAPAPVAAPPPPPP
PPGAHLYEELGDSTMRGYASEQQQLLRPSLLKPEELSMESGIDPGQEYGQDYYSYEHGYE
MPQYGSRRRLLPPAGPEEYGEVVGEAEEEEEYEEEEWARKRMIKLVVDRGYEGSSPGEDS
APECQPNRLQHPSVHSHVNGNIYIAQNGSVVRTRRACLADTLKASSPGRLGRHFKKLDRL
AVTQEENVPLNTLSKGPFSTEKMNPRPTLVTFAPGPVGADSPAGQPLGPRLRSPGEQVPM
GDTTNIKEPLQFHGDHTHSDDEELWMGPWNNLHIPMTKL
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgttacaacagtgttatctctggaaatggctagcttcagggattatcctcggagcgctc
ttcgccctctgcttcggccagtatgatgatgattgcaaactagctaggggaggaccgcca
gcgaccatagttgctatcgatgaagagagtcggaatggtacgattctggtggataacatg
ctcatcaaagggactgcgggaggaccagatcccaccatcgaactttccttaaaggacaac
gtggattactgggtgttgctggaccctgtcaaacaaatgcttttcctgaacagcacgggc
cgagttctggatagagaccccccgatgaacatacactccatcgtggtgcaagtccagtgc
atcaacaagaaggtgggcactgtgatctaccatgaagttcgaattgtggtgagggacagg
aatgacaactcgcccacgttcaaacatgacagttactacgccaccgtgaacgagctcact
ccagttggcaccacgatattcaccggattttcgggagacaatggagctacggacatagat
gatggcccaaacggacagatagaatatgttatccaatacaatccagatgatccgacatcc
aatgacaccttcgaaattcccctcatgttgactggaaatgtagtgttaaggaagaggctc
aactatgaagacaagactcggtactttgtcatcatccaagctaatgatcgtgcacaaaat
ctgaatgagcgacgaaccaccaccaccactctcaccgtggatattctggatggcgatgac
ttgggtccgatgtttcttccctgtgtcctcgtgccaaacactcgtgattgtcgccctctc
acctaccaagctgccatccctgaattgagaactccggaagaactgaatcccatcattgtt
accccgcccatccaagctgttgaccaggatcgcaatattcaaccgccatcagatagacca
ggaatcctctactctatccttgttgggactcctgaggattacccgcgatttttccaaatg
catcctaggactgcagaacttagtctcctggagccagtaaacagagactttcaccagaaa
tttgatttggttattaaggctgaacaggacaatggtcacccgctccctgccttcgccagt
ctacatatcgaaatactggacgagaacaaccagagcccgtacttcacgatgcccagttac
caaggctatatcctggaatctgccccagtgggagcaaccatctccgacagtctaaatctg
accaccccgctgagaatcgtggctctggacaaggatatagaagatacaaaagacccagag
cttcacctttttctgaatgattatacatcagtcttcaccgtcacgcagactggcatcact
cgctacctcaccttacttcagccagtggacagggaagaacagcaaacatacactttttcg
ataacagcatttgatggtgtgcaagagagcgagccagttatcgtcaatattcgagtgatg
gatgcaaatgataacactccaaccttccctgaaatatcctacgatgtctatgtttatacc
gacatgagccctggcgacagtgtcatacagctcacggccgtggacgcggacgaggggccc
aacggggagatcacgtacgacatcctggtgggcgcccagggcgacttcgccatcaaccgc
accagcgggctcgtcaccgtggccccggggcgggcgctcaccgtcggccgcacctacgcg
ctcaccgtccaggccgcggataacgcgcctcccgccgagaggaggcactccatctgcacc
gtgtacattgaagtgcttcctcccaataatcaaagccctcctcgcttcccacagttgatg
tacagccttgaaatcagcgaagccatgaggattggtgctgttttattaaatctacaggca
actgatcgagagggtgacccgataacgtatgccattgagaatggagaccctcaacgagtt
tttaatctttcagaaactactgggattctaaccttagggaaagccctggacagggagagc
accgatcgctacatcctgatcgtcactgcttcggatggcaggcccgatgggacctcgact
gctactgtaaatgttgtggtgacagatgtcaatgacaacgctccagtgtttgacccctat
cttcctagaaatctgtctgtggtggaagaagaagccaatgcctttgtgggtcaagtacgg
gcaacagaccctgatgctggaataaatgggcaggtgcactacagtttgggcaacttcaat
aatctctttcgcatcacgtccaatgggagtatttacacagcagtgaagctgaacagagaa
gtcagggactcctaccagcttgtcgttgtggcaaccgatggagcggtacaccctcgccac
tcaactctaacactggcaatcaaagttctggatattgatgacaacagtcctgtgttcacc
aattcaacgtatactgtcgtcgtggaagagaacctgccagctgggaccaccttccttcag
atagaggccaaagatgtagaccttggagcaaatgtgtcttatcggatacgaagcccagaa
gtaaagcacttttttgcactgcacccatttacaggagaactctcccttttaaggagtttg
gactatgagtcctttccagagcaggaagcaagcatcacttttctcgtggaggccttcgat
atttatggaacaatgccacctggcattgctactgtcacagtgatagtaaaggatatgaat
gattatcctccagtgttcagtaaacgaatctacaaagggatggtggctccggatgctgtc
aagggcacacctatcacaaccgtttatgccgaggatgcagacccccctggattacctgca
agtcgtgtgaggtacagagtggatgatgtccagtttccttatcctgccagtatttttgac
gtagaagaagattctggaagagtaataactcgagtcaatcttaatgaagagcctacaaca
atttttaagctggtggttgttgcttttgacgatggtgagcctgtgatgtccagcagtgcc
acagtgaaaattctcgtcttacatcctggagaaatcccacgcttcacacaagaggaatat
agaccccctccggtgagtgagcttgcaaccagagggaccatggtgggcgtgatttctgca
gcggccatcaaccagagcattgtgtactccatcgttgcaggaaatgaagaggatatgttt
ggaattaacaacatcacgggtgtcatctatgtgaatgcccccctggactatgagaccagg
accagctatgtacttcgcgtccaggctgattccctagaagtggtcctcgccaatcttcga
gttccttcgaaaagcaatacggctaaagtgtatattgagattcaggatgaaaatgatcat
cccccagtgtttcagaaaaaattctacattggaggtgtatctgaagatgcaagaatgttt
acttctgtgctcagagttaaggctactgacaaagatactggcaactatagtgccatggcc
taccgactcatcatcccaccaattaaagagggcaaagaaggattcgtggtggaaacgtac
accgggctcataaaaactgctatgctcttccacaacatgaggaggtcctacttcaagttc
caggtcatcgccacggacaactatgggcagggactcagtggcaaagcagacgtactggtc
tccgtggtcaatcagctggacatgcaggtcatcgtttcgaacgtgcccccgactctggtg
gaaaaaaagattgaagatcttacagagattttggatcgctatgttcaggagcaaatccct
ggtgccaaggtggtggtggagtccattggtgctcgcaggcatggggatgccttttctcta
gaagattacaccaaatgtgacctgactgtctacgcaatcgacccccaaaccaacagagcc
atcgacagaaatgagctttttaaatttttggatggcaaactacttgatatcaataaagac
tttcagccgcattatggggaaggaggacgcattttggagatccggactccagaggcagtg
accagcattaaaaagcgaggagaaagtctgggctacacagaaggggccttgctggcgctt
gccttcatcatcatcctctgctgcattcctgccattttggtcgttctggtcagctacaga
cagtttaaagtccgccaagccgagtgcaccaagacggcgcgcatccagtcggccttgccc
gcggccaagcccgccgcgcccgcccctgcacctgtggccgcacccccgccgcccccgccg
ccccccggggcgcacctgtacgaggagctgggggacagcaccatgagaggttatgcatca
gagcaacagcaactgctgaggccttctcttcttaaaccagaggagttatccatggagtct
ggaattgatcctggccaggaatacggacaagattattacagttatgagcatgggtatgag
atgccgcagtatgggagccgtcgccgcctgttaccaccggctggaccagaggagtatggt
gaggtagttggtgaagccgaggaggaggaggagtacgaggaggaagagtgggcgagaaaa
agaatgatcaagctggtggtggatcgtgggtatgaaggcagctcccccggggaggacagt
gcccctgagtgccagccaaaccgcctgcagcaccccagtgtgcacagccacgtcaatggc
aacatctacatcgcccagaacgggtcggtggtgaggacccgccgggcctgcctcgctgac
accctgaaagcttcctccccgggccgcctggggaggcactttaagaaactcgacaggctg
gcggtgacacaggaagagaatgttcccctgaacacattgtccaaggggcccttctccacg
gagaagatgaacccgaggccgactctggtgacgtttgcccccgggcccgtgggggccgac
agtcctgcagggcagccgctggggcccaggctgagaagcccaggggaacaggtgcccatg
ggtgacactacgaacatcaaggagcctttgcaattccacggcgaccacacgcactccgac
gacgaggagctttggatgggtccctggaacaacctccacataccaatgacaaaactgtga
DBGET
integrated database retrieval system
