Canis lupus dingo (dingo): 112672129
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Entry
112672129 CDS
T08371
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein isoform X1
KO
K06838
slit 1
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04360
Axon guidance
clud04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112672129 (SLIT1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
112672129 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clud00536
]
112672129 (SLIT1)
Glycosaminoglycan binding proteins [BR:
clud00536
]
Heparan sulfate / Heparin
Axon guidance molecules
112672129 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
hEGF
LRRCT
LRR_1
LRRNT
EGF_TEN
LRR_9
LRR_14
EGF_DL_JAG
EGF_Teneurin
EGF_3
LRR_EndoS
EGF_2
Motif
Other DBs
NCBI-GeneID:
112672129
NCBI-ProteinID:
XP_025322558
Ensembl:
ENSCAFG00020005820
LinkDB
All DBs
Position
28:complement(10465727..10636121)
Genome browser
AA seq
1534 aa
AA seq
DB search
MALAPRRGPPARRVRPELWLLLWAAAWRLGATACPALCTCTGATVDCHGAGLQAIPKNIP
RSTERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQ
LHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL
RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT
QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCSCSNGIVDCRGKGL
TAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLN
SLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTEDYQLNSECNSDAVCPHKCRCEASLAECSSLKLTKIPERIPQ
STAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ
LESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTL
QALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE
EGQEEGSCLPRPQCPQECACLDTVVRCSNKHLHVLPKGIPKNVTELYLDGNQFTLVPGQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH
GNDISTLREGIFTDVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCVGPPDME
GKLLLTTPAKKFECQGPPTLAVQAKCDPCLSSPCRNQGTCHNDPLEVYRCVCSSGYKGRD
CEVSLDGCSSSPCGNGGTCRPQEGGDAGFTCSCPPGFEGPTCEVNTDDCVEHTCANGGIC
VDGVGNYTCQCPLQYTGRGCEQLVDFCSSDLNPCQHEAQCVGTPDGPRCECAPGYVGDNC
SENQDDCRDHRCQHGAQCVDEVNSYSCLCAEGYSGQFCEAPPRPPAPRSPCEGTECQNGA
NCVDQGSGPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDN
GILLYNGDNDHMAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNL
SIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYIN
NELQDFTKTRMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWGGLHCDQPADGP
CHGHKCVHGKCVPLDALSYSCQCQDGYSGALCNQARAPADPCGGLQCLHGHCQVLATKGA
HCVCDPGFSGELCEQESECRGDPVRDFHQVQRGYAICQTTRPLSWVECRGSCPGQGCCQG
LRLKRRKLTFECSDGTSFAEEVEKPTKCGCAVCA
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggcgccccggagggggcccccggcgcggcgcgtccggcccgagctctggctg
ctgctgtgggcggccgcgtggcgcctgggtgccacggcgtgccccgcgctctgcacctgc
acgggcgccacggtggactgccacggcgcggggctgcaggccatcccgaagaacatcccg
cggagcaccgagcgcctggaactcaatggcaacaatatcactcggatccacaaaaatgac
ttcgtggggctcaagcagctgcgagtgctgcagctgatggagaaccagattggagtggtg
gaacggggggcttttgacgacatgaaggagctggagcggctacgactgaaccggaaccag
ctccacacgttgccagaactgctgttccagaataaccaggctctttcgagactggacctg
agtgagaacacaatccaggccatccccagaaaagcttttcgtggagctacagacctcaaa
aatttacagctggacaagaaccagattagctgcatcgaggaaggagccttccgggctctg
cgggggctggaggtgctgaccctgaacaacaacaacatcaccaccatccctgtgtccagc
ttcaaccacatgcccaagctgcggaccttccgcctgcactccaaccatctgttctgcgac
tgccacctggcctggctctcacagtggctgaggcagcggccaaccatcgggctcttcacc
cagtgctcaggccccgccagcctgcgtggcctcaacgtggctgaggtccagaagagtgag
ttcagctgctcaggccaaggggaggcggggcgagtgccttcctgcaccctttcctctggc
tcctgcccggccatgtgctcctgcagcaacggcattgtggactgtcgcggcaaaggcctc
accgccatccccgccaacctgcctgagaccatgacggagatacgcctggagctcaatggg
atcaagtccatccccccaggagccttctctccctacagaaagctgcggaggatagacctg
agcaacaaccagattgcagaaatcgcgcccgatgccttccagggcctccgctccctgaac
tcgctggtcctgtatgggaacaagatcacagacctcccccggggtgtgtttggaggcttg
tacaccctacagctcctgctcttgaacgccaacaagatcaactgtgtccggcccgatgcc
ttccaggatctgcagaacctctcacttctctccctgtatgacaacaagatccagagcctt
gccaagggcaccttcacctccctgagggctatccaaaccctgcatctggcccagaaccct
ttcatctgtgactgtaacctcaagtggctggcggacttcctgcgcaccaaccccatcgag
acgagcggggcccgctgtgccagccctcgacgccttgccaacaagcgcatcgggcagatc
aagagcaagaagttccggtgctcagccaaagagcagtacttcattccaggcacagaggac
taccagctgaacagcgagtgcaacagcgacgcagtctgtccccacaagtgccgctgtgag
gccagcctggccgagtgctccagcctgaagctcaccaagatcccagagcgcatcccccag
tccacggctgagctacgattaaacaacaatgagatttccatcctggaggccactgggata
tttaaaaaactcactcatctgaagaagatcaatctgagcaacaacaaggtgtcggaaatc
gaagatggggccttcgagggcgccgcctctgtgagcgagctgcacctgacggccaaccag
ctggagtccatccggagcggcatgttccggggcctggacggcttgaggaccctgatgctg
aggaacaaccgtattagctgcatccacaacgacagcttcacaggcctgcgcaacgtccgc
ctcctctcgctctatgacaaccagatcgccaccatctcccccggggccttcgacaccctg
caggccctgtccacgctaaacctcctggccaaccctttcaactgcaactgccagctggcc
tggcttggcgactggctgcggaggaggaagatcgtgacagggaacccacggtgccagaac
ccagatttcttgaggcagatccccctgcaggacgtggccttccctgacttcaggtgcgag
gaaggccaggaagaggggagctgcctgccccgcccacagtgcccccaggaatgtgcctgc
ctggacaccgtggtccgatgcagcaacaagcacctccacgtcctgcccaagggcatcccc
aagaatgtcacagaactctacttggacgggaaccagttcacactggttccgggacagctg
tccaccttcaagtacctgcagcttgtggacttgagtaacaacaagatcagctccttaagc
aattcctccttcaccaacatgagccagctgaccactctgatcctcagctacaatgccctc
cagtgtatccctcctctggccttccaggggctgcgctccctgcgtctgctgtccctgcat
ggcaatgacatctccaccctccgagagggcatcttcacagacgtgacctccctgtctcac
ctggccattggcgccaaccctctgtactgtgactgccatctccgctggctgtccagctgg
gtgaagacaggctataaggagccaggcattgcccgctgtgtggggcccccagacatggag
ggcaagctgctcctcaccacacctgccaagaagtttgaatgccaaggtccccccaccctg
gctgtccaggccaagtgcgatccctgcttatccagcccgtgccggaaccagggcacctgc
cataacgaccccctggaggtgtacaggtgtgtctgctccagtggctataagggccgagac
tgcgaagtatccctggatggctgttccagcagcccctgtggaaatggagggacctgccgc
ccacaggagggcggggacgccgggttcacgtgttcctgtccccccggctttgaaggccca
acctgtgaggtgaatacggatgactgtgtggagcacacatgcgccaatgggggtatctgt
gtggatggtgtgggcaactacacctgccagtgccccctacagtacacgggaaggggctgt
gagcagctggtggacttctgctcctcagatttgaacccgtgtcagcacgaggcccagtgt
gtgggtactccagatgggcccaggtgtgagtgtgcaccaggttacgtgggtgacaactgc
agtgagaaccaggatgactgcagggatcaccgctgccagcatggggcccagtgtgtggat
gaagtcaacagctactcctgcctctgtgctgagggctacagcgggcagttctgtgaggcc
cctccccgccctcctgcccccagaagcccctgcgaggggacagagtgccagaatggggcc
aactgtgtggaccagggcagtgggcctgtgtgccagtgcctcccaggcttcggcggcccc
gagtgtgagaagttgctcagtgtcaactttgtggatcgggacacctacctgcagttcact
gacctgcagaattggccccgggccaacatcacgctgcaggtctccacggcagaggacaat
gggatcttgctgtacaatggagacaatgaccacatggcagtggagctgtaccagggtcac
gtgcgtgtcagctatgacccgggcagctaccccagctcggccatctacagtgccgagacg
atcaatgatggacagttccacaccgttgagctggtcacctttgaccagatggtgaatctc
tccattgatggaggcagtcccatgaccatggacaattttggcaaacactacacactaaac
agcgaagctcccctctacgtgggagggatgccagtggatgtgaactcagccgccttccgc
ctgtggcagatcctcaacggcaccagcttccacggttgcatccgaaacctatacatcaac
aatgagctgcaggacttcactaagacgcggatgaagccaggcgtggtgccaggctgtgag
ccctgccgaaagctctactgcctgcatggcatctgccagcccaatgccaccccggggcct
gtgtgccattgtgaggccggctgggggggcctacactgtgaccagccagccgatggcccc
tgccatggccacaagtgtgtccacggaaaatgtgtgcccctcgacgctctttcctacagc
tgccagtgccaggatgggtactcgggggctttgtgcaaccaggcgagggcacctgcagat
ccttgtgggggcctgcagtgcctacatggccactgccaggtcttggccaccaagggggca
cactgtgtgtgtgaccccggtttttcgggcgagctgtgtgagcaagagtccgagtgccgg
ggggaccctgtccgggactttcaccaggtccagaggggctatgccatctgccagaccacg
cgcccgctgtcgtgggtggagtgccggggctcctgcccaggtcagggctgctgccagggc
ctgcggctgaagcggaggaagctcacctttgagtgcagcgacgggacctcttttgccgag
gaggtggagaagcccaccaagtgcggctgcgccgtctgcgcctag
DBGET
integrated database retrieval system
