Canis lupus dingo (dingo): 112676510
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Entry
112676510 CDS
T08371
Symbol
KDM2B
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112676510 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clud03000
]
112676510 (KDM2B)
04121 Ubiquitin system [BR:
clud04121
]
112676510 (KDM2B)
03036 Chromosome and associated proteins [BR:
clud03036
]
112676510 (KDM2B)
Enzymes [BR:
clud01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
112676510 (KDM2B)
Transcription factors [BR:
clud03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
112676510 (KDM2B)
Ubiquitin system [BR:
clud04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112676510 (KDM2B)
Chromosome and associated proteins [BR:
clud03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
112676510 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
112676510 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
112676510
NCBI-ProteinID:
XP_025329630
LinkDB
All DBs
Position
26:7958043..8078328
Genome browser
AA seq
1304 aa
AA seq
DB search
MRQLLRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKDFNYEYV
QREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFV
RYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQTEATNA
IAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEW
VLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPM
QLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLIDAPRKP
SIDGFSSDSWLEMEEESCEQQPQEEEKEEEEEEEEEEEGADKVPKPPADGPPSPTSTPSE
DQEAPGKKPKAPAMRFLQRTLSNESEESVKSTTVPTDYPKTPTGSPATGVSAKWTHLTEF
ELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAITGVPVVTW
PKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCKD
MKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLMECSICN
EIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEQK
MNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPPDGILRRKSDDVHLRRKRKYEKPQEL
SGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKPGKEDKLFRKKRRSW
KNAEDRMALANKPLRRFKQEPEDDLPEAPPKARESDHSRSSSPTAGPSTEGAEGPEEKKK
VKIRRKRRLPTKELSKELSKELNQEIQKTENSLANENHQPIKSEPESESEEPKRPLGLCE
RPHRFSKGLTGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKCIQMERHVIRPPPISPPP
DSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTCIDLNHCKS
ITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSC
PLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITDASLRL
IIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSFFKRC
GNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagctgctgcgcccgattgaccgccagagatacgacgagaacgaggacttgtcg
gacgtggaggagatcgtcagcgttcgcggcttcagcctggaggagaagctgcgcagtcag
ctgtaccagggggacttcgtgcacgccatggagggcaaagatttcaactacgagtatgtg
cagagagaagcgctcagggttcccctgatatttcgagaaaaggatggcctggggattaag
atgcccgaccctgatttcacagtccgagatgtcaaactcctagtgggtagccggcggctg
gtggatgtgatggatgtgaacacccagaagggcacggagatgagcatgtcccagtttgtg
cggtactacgagaccccggaggctcagcgggacaagctgtacaacgtcatcagccttgag
ttcagccacaccaagctggagcacctggtcaagcgtccgactgtggtagacctggtggac
tgggtggacaacatgtggccacagcatctgaaggagaagcagacagaagccacgaatgcc
attgcggagatgaaatacccgaaagtgaagaagtactgtctgatgagcgtgaaaggctgt
ttcactgacttccacatcgactttggaggcacttccgtttggtaccatgttttccggggt
gggaagatcttttggctgattcctccaaccctgcacaatttggcactgtacgaggagtgg
gtgctgtcaggcaaacagagtgacatcttcctgggagaccgcgtggagcgatgccaaaga
attgagctgaaacagggctacacgtttttcatcccttccggttggattcatgcagtctac
acccccgtagactctctggtatttggcggaaacatcctgcacagctttaacgtgcccatg
cagctgcggatctatgagatcgaggacagaacacgggtgcagcccaaatttcgttacccc
ttctactatgagatgtgctggtatgtcttggaaagatacgtgtactgtgtgacccagcgg
tcctacctcactcaggaataccagagagaatccatgcttattgatgccccaagaaagccc
agcatagacggcttctcatctgattcctggttggagatggaggaagagtcttgtgagcag
cagcctcaagaggaggagaaggaggaggaagaggaggaggaggaggaggaggagggtgca
gataaggtgcccaagcctcccgctgatggccctccgtcacccaccagcaccccttcagag
gaccaggaggcccctgggaagaagcccaaagcacctgccatgcggttcctccaaaggact
ttgtctaacgagtcagaagaaagtgtgaagtccacgacggtgcccacagactaccctaag
acacccactggctcccctgccacgggggtctccgccaagtggacccacctcactgagttt
gagctgaagggcctgaaagcgctggtggagaaactggaatccctcccagagaacaagaag
tgtgtccctgagggcatcgaggacccccaggcactcctggagggtgtgaagaatgtcctg
aaggagcacgcggatgacgaccccagtctggccatcactggggtccctgtagtcacttgg
ccaaagaagactccaaagaaccgggcggtaggtcggcccaaggggaagctgggcccagcc
tctgccgtgaagttggccgccaaccggacaacggcgggagctcgccggcgccggacgcga
tgccgcaagtgcgaggcctgcctgcggaccgagtgtggagagtgccacttctgcaaggac
atgaagaagttcgggggccccgggcggatgaagcagagctgcatcatgcgacagtgcatc
gcgccagtgctgccccataccgccgtgtgcctggtgtgtggcgaggcagggaaggaagac
acagtggaagaggaagaaggaaagtttaacctcatgctcatggagtgctccatctgcaat
gaaatcatccaccctggatgccttaagattaaggagtcagagggcgtggtcaacgatgag
cttccaaactgctgggagtgtccgaagtgtaaccacgccggcaagaccgggaaacaaaag
cgtggccctggctttaagtatgcctccaacctgcccggctccctgctcaaggaacagaag
atgaaccgggacaataaggaaggacaggagcccgccaagcggcggagtgagtgtgaggag
gcgcctcggcgcaggtccgacgagcaccccaagaaggtgcccccggatggcatcctgcgc
cgaaagtcggacgatgtgcacttgaggaggaagcggaaatacgagaagccccaagagctg
agcgggcgcaagcgagcctcgacgcttcaaacgtcccccggttcctcctctcacctctcg
ccgaggccccctctaggcagcagcctcagtccctggtggagatccagtctcacttacttc
cagcagcagctaaaacctggcaaagaagataagcttttcaggaaaaagcggcggtcctgg
aagaacgccgaggaccggatggctctggccaataagcctctccggcgcttcaagcaggag
ccggaggatgacctgcccgaggcaccccccaaggcccgggagagcgaccactcacgctcc
agctcccccacagctggacccagcacagagggggcagagggccctgaggagaagaaaaag
gtaaagatacgtaggaaaaggcggcttcccaccaaggagctgagcaaggagctgagcaag
gagctgaaccaagagatccagaagacggagaacagcctggccaacgagaaccaccagccc
atcaagtcagagcccgagagtgagagcgaagagcccaagcggcccctgggcctctgcgag
cgcccccaccgcttcagcaaggggctcactggcaccccccgggagctgcgacaccagctg
gggcccggcttgcgcagcccaccccgtgtcatctcccggccccctccctccgtgtcccca
cccaagtgcatccagatggagcgacacgtgattcggccaccccccatcagccccccgcct
gactcgctgcccctggatgatggggcggcccacgtcatgcacagggaggtgtggatggcc
gtcttcagctacctcagccaccaagacttgtgtgtctgcatgcgggtctgcaggacctgg
aaccgctggtgctgcgataagcggttatggacctgcatcgatctgaaccactgcaagtcc
atcacacccttgatgctgagcggcatcatccggcggcagccagtctccctggacctcagc
tggaccaatatctccaagaaacagctgagctggctcatcaaccggttgcctgggcttcga
gacttggtgctgtcgggctgctcgtggattgcagtctcagctctctgtagctctagctgt
ccgttactccggaccctggatgtccagtgggtagaaggactaaaggacgcccagatgcgg
gatctcctgtccccacccacagataacaggccaggtcagatggacaatcggagcaagctc
cggaacattgtggagcttcgtctagcaggcctggacatcacggacgcctccctgcggctc
atcatacgccacatgcccctgctctccaagctccaccttagttactgtaatcatgttact
gaccagtccatcaacctgctcaccgctgtgggcaccaccacccgagactccttaaccgaa
atcaacctatcagactgcaataaggttactgaccagtgcctgtccttcttcaaacgctgt
ggaaatatctgtcatattgatctgaggtactgcaagcaagttaccaaggaaggctgtgag
cagttcatagctgaaatgtctgtgagcgtccagtttgggcaagtggaagaaaaactcctg
cagaagctgagttag
DBGET
integrated database retrieval system
