Canis lupus dingo (dingo): 112677544
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Entry
112677544 CDS
T08371
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112677544 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112677544 (SMG6)
03032 DNA replication proteins [BR:
clud03032
]
112677544 (SMG6)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
112677544 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
112677544 (SMG6)
DNA replication proteins [BR:
clud03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
112677544 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
112677544
NCBI-ProteinID:
XP_025331890
Ensembl:
ENSCAFG00020009770
UniProt:
A0A8C0K9R9
LinkDB
All DBs
Position
9:complement(47361098..47603826)
Genome browser
AA seq
1412 aa
AA seq
DB search
MAEGLERVRISASELRGILAALAPQAGSRENMKEPRQRKDNRRPDLEIYKPGLSRLRNKP
KIKEPSGSDEFKDEIVNHRDSSAVGNDTQLIKDICKELDNQHQNGPVDPENIGAQESFPR
TSGQEDRSLRIIKRTKKPDMQIYQPGRRLQTLTKESTSRVGEEEILNQVEQLRVEEDDYR
GNVKEEVMNKLDKNEAEKSLNGDRVRAAKGEKGKRIEKGEGIRKGNDDLAQGKPGSAKRY
SRSDKRRNRYRTCSTSSAGSNNSAEGAGLTDNGCRRRRQDRTKERPRLKKQVSMSSTDSL
DEDRIDEPDEPRRSSERKKHLERSWSGRGEGEQKSNGKENRGTLRVTFDAETMNKDSPMV
ISSREDVDRIKPDKSLSSGGKGSEKQESKHLKQELRGRGRGILILPAHTTLSVNSTGSPE
SAPLGPRLLFGSGSKGSRSWGRGGTTRRLWDPNNPDQKPALKSQMPQLHFLDTDDEVSPT
WGDSRQAQASYYKFQNSDNPYYYPRTPGPASQYPYTSYSALQYPVGPTNGVYPGPYYPGY
PTASGQYICSPLPANTMSPEEMEQHMRNMQQQELHRLLRVADNQELQLSNLLSRDRISPE
GLEKMAQLRAELLQLYERCILLDIEFSDNQNVDQILWKNAFYQVIEKFRQLLKDPNVENP
EQIRNRLLELLDEGSDFFDSLLQKLQVTYKFKLEDYMDGLAIRSKPLRKTVKYALISAQR
CMICQGDIARYREQANDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTRRKLDAVY
YYMRSLAASNPILTAKESLMSLFEETKRKAEQMEKKQHEELELSPDQWRKGKKSTFRHVG
DDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGSLSPSDLNKRFILSFLHAHGKLFTRI
GMETFPAVAEKVLKEFQVLLQHSPPPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVI
QEQATALGLAMFSLLVRRCTYLLKESAKAHLSSPEDEDDQDDIKVSSFVPDLKELLPSVK
VWSDWMLGYPDTWNPPPTSLDLPSQVAMDVWSMLADFCNILTAVNQSEVPLYKDPDDDLT
LLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLA
FKGGKYVSVAPVPDTMGKEMGSQEGKQLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRA
KKLALARKIAEQQRRQEKIQAVLEDQSQMRQMELEIRPLFLVPDTNGFIDHLASLARLLE
SRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLERRFESRDTCLRA
LTSRGNELESIAFRSEDITGQLGNNDDLILSCCLHYCKDKAKDFMPTNKEEPIRLLREVV
LLTDDRNLRVKALTRNVPVRDIPAFLTWAQVG
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggttggagcgtgtccggatctccgcgtcggagctgcgagggatcctggcc
gctctggctccgcaggccgggagcagagaaaacatgaaggagcccaggcaacgcaaagat
aaccggcgcccagatctggaaatctataagcctggtctttctcgactgaggaacaaacct
aaaatcaaggaaccttctgggagtgacgaatttaaggatgaaattgttaatcacagagat
tcctctgctgttggaaatgatacacagctcattaaagacatatgcaaggaattggataac
caacatcaaaatggtcctgtagacccagaaaatattggggctcaggagtcctttcctagg
acttctggacaagaggatcgaagtctaagaattatcaagagaacaaagaaacctgatatg
cagatctatcagcctggaaggcgtttgcagactcttaccaaagaatcgaccagcagggtg
ggtgaggaagaaatcctcaaccaggtggaacaactgagagtagaagaagatgactatagg
ggaaatgtgaaagaggaggtcatgaataaactagacaaaaatgaggcagaaaagagccta
aatggtgacagagtaagggctgcaaaaggagaaaaaggaaagaggattgagaagggggag
gggataaggaaaggaaatgatgacctggcacaggggaagccgggttctgcaaagcgctac
tcccgctcagacaagcggaggaaccgctaccgcacctgtagcactagctcagctggcagc
aacaacagtgctgaaggggctggcctgactgataacggatgtcgtcgccgccgacaggac
aggaccaaggagaggccacgactgaagaagcaagtatctatgtcctcaactgactcttta
gatgaggacagaattgatgagcctgatgagcccaggaggagctcggaaaggaaaaaacat
ttagaaagaagctggtctggccgtggggagggagagcagaaaagcaacggaaaagaaaat
cgaggcacccttcgtgtcacttttgatgcagaaaccatgaacaaagattctcccatggtg
atatcatccagggaggatgtggataggataaagcctgacaaaagcttgagcagtgggggc
aaaggctctgagaagcaggagtccaaacacctgaaacaagaacttcgaggtcgtggacgt
ggcattctgatattgcctgcccataccaccctatctgtcaattcaactggttctccggaa
tctgcacctttgggacctcggcttttgtttggatctggtagtaagggatctcggagttgg
ggccgaggaggcaccactcggagattatgggacccaaacaatcctgatcagaaacctgct
cttaagagccagatgccccagctgcatttcttagacactgatgatgaagtcagccctact
tggggtgactcccgccaggcccaagcatcctactataagtttcaaaactctgacaacccc
tattattatccccggacaccaggccctgcctctcagtatccctatacaagctatagtgct
ctgcagtaccccgtgggccccacgaatggtgtgtaccctgggccttactacccaggctac
ccaactgcatcaggacagtatatttgtagccctctccctgccaacactatgagtcctgaa
gagatggaacagcacatgaggaacatgcagcagcaggagctacataggcttctccgggtg
gctgacaaccaggaactgcagctcagcaaccttctctccagggaccgcatcagtcctgag
ggcctggagaagatggctcagctcagagctgaactgctgcagctatatgagcgctgtatc
ctattagatattgagttctctgataatcagaatgtggatcagatcctgtggaagaatgct
ttctatcaggtgattgagaagttcaggcagcttctcaaggatccgaatgttgagaaccca
gagcagattcggaacagacttttggagctcttggatgagggtagtgacttctttgatagt
ttgcttcagaagctgcaggttacttacaagttcaaactggaggactacatggatggtctt
gccattcgcagcaagccattacgcaagacagtaaaatatgctttgatcagtgcccagcga
tgtatgatttgccaaggagatatcgctaggtatcgggaacaagccaacgacacagcaaac
tacgggaaagcacgcagttggtatctaaaggcacagcatattgctcccaagaatgggcgt
ccctataaccagctggctctgctggcagtgtacacgaggaggaagcttgatgctgtctat
tactatatgcgcagtttagctgccagcaaccctatcctgactgccaaggagagtctcatg
agcttgtttgaggagaccaaacgaaaggcagaacagatggaaaaaaagcaacatgaggaa
ttggaactgagccctgaccagtggcggaaaggaaagaagtctactttccggcatgtggga
gatgacaccactcgcttagagatctggatccatccatcacatccccggtcctcccagggc
actgaatctgggaaggattctgagcaggagaatgggctgggcagcctgagcccaagtgat
ctgaacaaaaggttcatcctcagttttctccatgcccatgggaagctgtttacccggatt
gggatggagacattccctgcggtggctgagaaagtcctcaaggaattccaggtgctgctg
cagcacagcccacctcctattggaagtacccgcatgctgcagcttatgaccatcaacatg
tttgctgtacacaactctcagctgaaagactgcttctcggaggagtgtcgctctgtgatc
caggagcaagccacagcactgggcttggccatgttttctctcctggtgcggcgctgtacc
tacttacttaaggagtctgccaaagctcatctgtcctcccctgaggacgaggatgaccaa
gatgacatcaaggtgtcttccttcgtcccggacctgaaggaactgctccccagtgtgaaa
gtctggtcagattggatgcttggctacccagacacctggaatcctccgcccacatccctg
gacctgccctcacaggttgctatggacgtgtggtcgatgctggctgatttctgtaacata
ctgactgcagtgaatcagtctgaggtgccactgtacaaggacccggacgatgacctcacc
cttcttatcctggaagaggatcggcttctctcgggttttgtccccttactggctgcccct
caggacccctgctacgtggagaaaacctcggataaggttattgcagccgactgcaaaagg
gtcacagtgctgaagtattttctggaagccctttgtggacaagaagagcctctcctggca
ttcaagggtggaaaatatgtgtcagtggcacccgtcccagacaccatgggaaaggaaatg
ggaagccaagagggaaaacaactggaagatgaggaggaggacgtggtgattgaagacttt
gaggaagattcagaggccgaaggcagcgggggtgaggatgacatcagggaacttcgggcc
aagaagctggctctggcaaggaagatagctgagcaacagcgtcgccaagaaaagatccag
gctgtcctggaggaccagagtcagatgaggcagatggagctcgagatcagacccttgttc
cttgtaccagacaccaacggcttcattgaccacctggccagtctggcacggctgctggag
agcaggaagtacatcctggtggtgcccctcattgtgatcaatgagctggacggcctggcc
aaggggcaggagacagaccaccgggctgggggctatgcccgtgtagtgcaggaaaaggcc
cggaagtccatcgaattcctcgagcggcgatttgagagtcgggacacttgtctacgggcc
ctgaccagccgtggcaatgaacttgaatccatcgcctttcgcagtgaggacatcactggg
caactgggtaacaacgatgacttgatactctcctgttgcctccactactgcaaagacaag
gctaaggacttcatgcccaccaacaaagaagagccaatccggctgctgcgggaggtggtg
ctgttgacagatgaccgcaacctgcgtgtgaaggcactgacgaggaatgtgcctgtgcgg
gacatcccagccttcctcacgtgggcccaggtgggctga
DBGET
integrated database retrieval system
