Canis lupus dingo (dingo): 112678099
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Entry
112678099 CDS
T08371
Name
(RefSeq) TAR DNA-binding protein 43 isoform X2
KO
K23600
TAR DNA-binding protein 43
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03015
mRNA surveillance pathway
clud05014
Amyotrophic lateral sclerosis
clud05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112678099
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112678099
05022 Pathways of neurodegeneration - multiple diseases
112678099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112678099
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
112678099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
TDP-43_C
RRM_5
RRM_11
Motif
Other DBs
NCBI-GeneID:
112678099
NCBI-ProteinID:
XP_035569240
Ensembl:
ENSCAFG00020002258
LinkDB
All DBs
Position
2:complement(83620645..83633180)
Genome browser
AA seq
298 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPVHLISNVYGRSTSLKVVL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtacattcgggtgacggaggacgagaacgacgagcccatcgagatcccgtcg
gaggatgacggcaccgtgctgctgtccaccgtcaccgcccagttccccggggcgtgcggg
ctgcgctaccggaacccggtgtcccagtgcatgcggggcgtgcggctggtggaggggatc
ctgcacgcccccgacgccggctggggcaacctggtgtacgtggtcaactaccccaaagat
aacaaaagaaaaatggatgagacagatgcttcttcagcagtgaaagtgaaaagagctgtc
cagaaaacttctgatttaatagtgttgggtcttccgtggaaaacgactgaacaggatcta
aaagaatattttagtacctttggagaagttcttatggttcaggtcaagaaagatattaaa
actggtcattcaaaggggtttggctttgttcgttttacggagtatgaaacccaggttaaa
gtaatgtcacagcgacatatgatagatggacggtggtgtgattgtaaacttcctaattct
aagcaaagcccagatgagcctctgagaagtaggaaggtgtttgttgggcgctgtacggag
gacatgaccgccgacgagctgcggcagttcttctgccagtacggagaagtggtagacgtc
ttcattcccaaaccgttcagggcctttgcctttgttacatttgcagatgatcaggttgcc
cagtctctttgtggagaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaagcacaatagcaatagacagttagaaagaagtggaagatttggtggtaatcca
gttcatctcatttcaaatgtttatggaagaagcacttcattgaaagtagtgctgtaa
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