Cyclopterus lumpus (lumpfish): 117725420
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Entry
117725420 CDS
T09199
Symbol
fbn1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04350
TGF-beta signaling pathway
clum04518
Integrin signaling
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117725420 (fbn1)
09133 Signaling molecules and interaction
04518 Integrin signaling
117725420 (fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117725420 (fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117725420 (fbn1)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117725420 (fbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
EGF
FXa_inhibition
TB
EGF_3
Fibrillin_U_N
EGF_FBN_1st
Plasmod_Pvs28
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
117725420
NCBI-ProteinID:
XP_034381468
Ensembl:
ENSCLMG00005020037
LinkDB
All DBs
Position
3
Genome browser
AA seq
2923 aa
AA seq
DB search
MRVDMPDSTCRGRLLQLAVALVALLSLCAELGDAAEVVDTERSETLTKQTDSRTARAKRR
GGSDVLRGPNVCGSRNNAYCCPGWKTLTGGNQCIVPICRSSCGDGFCSRPNMCTCPNGQI
APSCGSKSVQHCNVRCMNGGTCAEDNCQCQKGYVGNHCGQPVCENGCLNGGRCVAPNRCV
CTYGFTGAQCERDYRTGPCFASVHNQMCQGQLTGIVCTKTLCCATVGRAWGHPCEMCPAQ
PQPCRRGFIPNHRTGACQDVDECQAIPGICEGGNCINTVGSFECKCPAGHKFNEVSQKCD
DLDECSNIPGLCGVGECSNTAGSYFCKCPQGYYTSSDGSRCIDSRGGYCFASLLNGRCAN
QNSQLLTKMQCCCDSGRCWSDGSSPEMCPIRGTEEYQKLCSQTPDGGVLPGRVPGGPDLP
GIYPVPYPGQTPGQVPGQVPGLYPVQNPIPGQGPGQIPGQFPGQFPGQYPGQFPGQFPGH
LPLQPPPGPSIIQTQNITNMCQAFRTLCLNGRCVPMPGIGYRCECNMGYRVNLRGECYDE
DECERSPCAHGECVNTPGSYICQCPAGFQTTATRTECRDLDECVANGRICNNGRCVNTVG
SFHCVCNAGFEITADGKNCQDQDECLIRNMCLNGLCINDDGSFKCICKPGFLLDNSGRMC
VDIDECETPGMCMNGHCVNTEGSFRCECMSGMAVGLDGRVCVDTHMRSSCYGGYKRGQCV
RPLFGAVTKSECCCASTEYAYGEPCQPCPPQSSADFLALCPSGPGISGDGRDINECALDP
DVCQNGVCENMLRTYKCTCNEGFEVDLTGKNCVDIDECLMNRQLCENGLCRNTPGSFTCQ
CPKGYLFDPETDICTDVDECLSSPCVNGECRNSQGSYVCLCSLGSSLDSSGMECIETTKS
TCWLKIVNNRCEVNINGATLKSHCCSTLGEAWNSPCAKCEKDPICGKGFARVKGNVCEDV
NECQVFPGVCINGKCLNTPGSFICQCPPGMTVDVTGRTCIDLRMEHCYLTHEDERCGAAI
AGKQRVDACCCSVGVAWGPECDECPERGTPEYIQLCPRGPGFSHRGDFINGRPFLKDLNE
CRMINTLCSNGRCRNTIGSFRCRCDNGYALDFDERNCTDIDECHISPDLCGQGRCINTAG
DFACECFEGYESGFMMMKNCMDIDECERNPLLCRGGDCVNTEGSFQCVCPDGHEIALDGS
ACLDINECNLSDRLCRNGQCVNMIGRYQCSCDTGYKSTENRLECVDIDECTIENGGCETF
CTNSEGGYECSCHSGYALMPDLRSCTDIDECEESPEVCDGGQCTNTPGTYQCLCYDGFMS
SDDMKTCLDVDECDLNPNICLSGNCENTKGSFICHCDPGYSVRKGTTGCTDVNECEIGAH
NCDRHATCTNTAGGFKCHCAPGWIGDGLKCTDLDECSNGTHMCSNNADCLNTMGSYRCAC
KDGFSGDGFYCSDSDECAENGNLCESGHCLNLPGGFRCECDMGFIPTSEGKACEDIDECT
FADICVNGRCQNIPGLFRCECSIGYELDRSGGNCTDINECADPTICINGICVNIPGSYHC
NCPADFELNPTRVGCVDTRSGSCYLDARSRGDASESLDCSNEIGVGVSKASCCCSLGLGW
GNPCESCPFVNSTEYKTLCPGGEGFRPNPITVILEDINECQELPGLCQGGQCINTFGSFQ
CECPRGYALNPETRVCEDINECERPGICGPGQCYNTIGNYTCICPVDYMQVNGGNNCMDM
RKSYCYRNFYSDNGTCDGELNFNMTKKMCCCSYNIGRAWNKPCEQCPVPSTDEFVILCGS
VRPGYYIDITTGRVIDIDECREIPGVCENGVCINMVGSFRCECPIGFVYNDKLLICEDID
ECQNGPVCQQNAACLNLPGSYRCECKPGYRSTSTGQCLDRNECIENPGVCNPGQCIDTLG
SYRCICPNGFKPTRDQSMCVDVDECERQPCGNGTCKNTVGSYNCLCYTGFQNSHNGDCID
VDECATQRGLCRNGQCLNTVGNFLCLCQDGYELTLDGRLCTDINECAVNPGTCGAGTCLN
MDGSYRCICPPGYFLHEETCEDIDECSQSPEMCTFGTCSNNEGSFICLCPEGFQVSASGR
RCLDIRVNYCYTKFENGRCLAPKPQNTSKAECCCTGMPGQGWGDPCEICPTKGEEGYPLL
CPNEGYQRGTDDHPKDIDECLNDPCINGQCINIDGSFRCECPMGYHLDITRVKCEDTDEC
AIGNPCGNGTCTNVIGGFECACDNGFEPGPMMTCEDINECSQNPLLCAFRCINVVGSYQC
KCPTGYVLREDKRMCKDQNECEDGIDDCASRGMTCKNLIGTYMCICSPGYTRQPGGDGCM
DLNECTAKPGTCKNGRCENTVGSFRCRCDQGFLANPTQTECIDNREGFCFTEVLTTLCQM
TSSNRNLVTKSECCCDGGRGWGTNCELCPLPGTTHYKKMCPLGPGFTTDGRDIDECRVMG
NLCRNGQCLNTLGSYTCNCKPGYSTDISSTLCVDVDECIQAPKPCNFICKNTEGGYLCSC
PRGYILQEDGKSCRDLDECSTKQHNCQFLCVNTIGGFTCKCPSGFTQHHSACIDNNECAT
DPNLCGSKGACQNTPGSFNCDCQRGFSLDSDGQACEDTDECDGNHRCQHGCQNLVGGYRC
SCPQGYLQHYQWNQCVDENECMNSQICGGASCHNTLGSFRCLCPTGFNYEQTGGGCSDVN
ECSTSHNPCKFGCSNTDGGYLCGCPSGYFRAGQGHCVTGLGFTGGDSGAGQGGEVDDNSL
SPEACYECKINGYPKKGRKRRSTNSTREEPLEDMQLTEKETVSLASVDIEDTLQFHLNIS
DLSNRDHILEFTPALSTLSDHVRYSIDYGNEEGYFKINQREGVSFLHLSRKKALPPGVYE
LQISSMPLYRKKELAELEDRHDKDYLTGQLGDILKMRVQIILH
NT seq
8772 nt
NT seq
+upstream
nt +downstream
nt
atgagagtggatatgcccgacagtacgtgtaggggacggctgctgcagttggccgtggct
ctggtggccttgctgtcgctctgcgccgagcttggagacgctgcagaggtggtggacacc
gagcgcagcgagacgctgaccaagcagaccgactccagaaccgccagggccaagaggagg
ggaggctcggacgtcctcagaggaccaaatgtgtgtggctcaaggaacaacgcctactgc
tgcccaggctggaagactctgaccggaggaaaccagtgcattgttccgatctgtcggagt
tcatgtggagatggtttctgctccagacccaacatgtgcacctgccccaacggccagatc
gccccatcctgtggatccaagtcagtccagcactgtaacgttcggtgtatgaacggggga
acgtgtgccgaggacaactgccagtgtcaaaagggctacgtgggaaaccactgtggccaa
ccggtttgtgaaaatggctgtctcaatggaggaaggtgtgtggctcccaaccgatgtgtg
tgtacctacggcttcaccggggctcagtgtgagcgagactaccgcactgggccgtgcttc
gcctcggtgcataaccagatgtgtcagggccagctcacaggcattgtgtgcacaaagact
ttgtgctgcgccacagtgggacgggcgtggggtcacccctgtgagatgtgcccagcccag
cctcaaccgtgccgcagagggttcataccaaaccaccgcaccggggcgtgccaagatgtg
gatgagtgccaggccatccctggcatctgtgaaggaggaaactgtatcaacacagtggga
tcctttgaatgcaaatgccccgctgggcacaagttcaacgaggtctcacagaaatgtgac
gatctggacgagtgttcaaacattccaggtctctgtggtgtcggtgaatgctctaatact
gccggcagctacttctgcaagtgtccccaaggatattacacctcctcggacggatccagg
tgtatagattctcgaggtgggtactgcttcgctagcctgctgaacgggcgctgcgccaac
caaaactcgcagctgttgaccaaaatgcagtgctgctgtgatagtggccgctgctggtct
gatggatcctcccctgaaatgtgccccattcgtggaacagaggagtaccagaaactgtgc
tcccagacacctgatggaggggtgctacctggtcgtgtaccagggggtcccgacttaccc
ggcatctacccagttccttatcctggtcaaactcctgggcaagttcctggacaggtacct
ggattgtatcctgttcaaaatcccatccctggccaaggaccgggtcagattcctggacaa
tttccaggacaatttccaggacaatatccaggacaatttccaggacaatttccaggacat
cttcctttacaacctccaccaggtcccagtattatccaaacccagaacatcaccaacatg
tgccaggccttccgcaccctctgcctgaatggcaggtgtgtgcccatgccaggcatcgga
tatcgctgcgagtgcaacatgggctacagggtgaatctaagaggagagtgctacgatgag
gacgaatgtgagagaagcccgtgtgcacacggagaatgtgtgaacacccctgggtcttac
atctgccagtgtcccgctggattccagacgactgcaaccaggacagagtgccgagatctg
gacgagtgtgtggcgaacggtcgaatctgcaacaacggccgctgcgtgaacactgtgggc
agcttccattgtgtctgcaacgctgggtttgagattacagcagatggaaaaaactgtcaa
gaccaggatgagtgtctgatcaggaacatgtgtctgaatggactgtgcatcaacgacgac
ggcagcttcaaatgcatctgtaaacctggattcctgctggacaacagcggacgcatgtgt
gtagacattgatgagtgtgagactccgggcatgtgtatgaacggccactgcgtcaacacg
gaggggtccttccgctgtgagtgtatgtctgggatggcagtcggcctggatggacgggtt
tgtgttgacacgcatatgcgcagttcgtgttatggtggctacaagcgagggcaatgtgtt
aggcctttatttggagctgtgaccaagtcggagtgctgctgtgccagcacggagtacgcc
tacggagagccctgccaaccctgcccaccacagagctctgctgacttcctggctctgtgc
cccagtggtcctggcataagcggcgatgggagagatattaacgagtgcgccctcgaccca
gacgtctgccagaacggggtgtgtgagaacatgctgaggacctacaaatgcacctgcaat
gaaggcttcgaggtagacctgacgggcaaaaactgtgttgacatcgatgagtgtctgatg
aacaggcagctgtgtgaaaacggcctgtgcaggaacacaccgggcagtttcacctgtcag
tgtcccaaaggatacctctttgatcccgagacagacatctgcaccgatgtggacgagtgt
ctgtcgagcccctgtgttaacggagagtgtcggaacagccaagggtcctatgtgtgtttg
tgttcactcggcagttcgctggacagctcggggatggagtgcatcgagacgactaagagc
acctgctggctgaagatagtcaacaatcgctgtgaggtcaacatcaacggggctacactg
aagtcccactgctgctccacgctgggagaagcctggaacagcccatgtgccaaatgtgaa
aaagatccaatctgcggtaaaggctttgcgagagtcaaaggaaacgtctgtgaagatgtg
aacgagtgtcaagtgtttcccggggtgtgtatcaatggcaaatgcctcaacacaccgggc
tccttcatctgccagtgccccccgggaatgactgttgacgtcactggcaggacgtgcatt
gacctgcgtatggagcattgctacctcacccatgaggatgagcgctgcggggctgccatc
gcagggaagcagcgtgtggacgcctgctgctgctcagtgggcgtggcctggggccctgag
tgcgacgagtgtccagagaggggcactccagagtacatccagctctgtcctcgtggccca
ggcttctcgcataggggggacttcatcaacggcagacccttcctcaaagatttaaatgaa
tgcaggatgatcaacaccctgtgctccaatgggaggtgtagaaacaccatcgggagcttc
cggtgtcgctgtgacaacggctacgctctggactttgatgagaggaattgcactgacatt
gacgagtgccacatctctccggacctgtgtggacagggcagatgtatcaacacggccgga
gattttgcatgcgagtgcttcgaaggttatgagagtggcttcatgatgatgaaaaactgc
atggacatcgatgagtgtgagaggaaccccctgctgtgccgtggaggtgactgtgtaaac
acggagggcagcttccagtgcgtgtgccccgatggacacgagatcgcactcgatggctcg
gcctgtctagatatcaatgaatgcaacctgagtgaccggctgtgcaggaacggccagtgt
gtcaatatgatcggccgctaccagtgttcctgcgacacgggatacaaatctacagagaac
agactggagtgtgttgacatcgacgagtgcaccatcgagaacggtggctgcgagaccttc
tgcaccaactcggagggaggctacgagtgcagctgccacagtggatacgccctgatgccg
gacctgaggagctgcaccgatattgatgagtgtgaagagagcccagaagtctgtgatgga
ggccagtgcaccaacaccccagggacgtaccagtgtctgtgctatgacggtttcatgtca
tctgacgatatgaagacctgcctcgatgtggatgagtgtgatctgaatccaaacatctgc
ctgagtgggaactgtgagaacacgaagggatccttcatctgtcactgtgacccgggatac
tctgtccgcaagggaaccacaggctgcacagacgtcaatgagtgtgagatcggagcccat
aactgtgacagacatgcgacctgcaccaacacagctggcggctttaaatgccactgtgct
ccaggatggattggcgacggactcaaatgcacagacctggacgagtgctccaacgggaca
cacatgtgcagcaacaacgcggactgtctcaacaccatgggctcgtatcgctgtgcgtgc
aaggatggcttctctggagatggattctactgctcagacagcgatgagtgtgcagagaac
ggcaacctgtgtgagagtggccactgtctgaacctgccaggaggcttccgctgtgaatgt
gacatgggcttcatcccgacttccgaagggaaggcctgcgaggacatagacgaatgtacc
tttgctgacatctgcgtcaatggacgttgccagaacatcccgggactttttagatgtgaa
tgtagcattggttatgaactggacaggagcggaggcaactgcacagatatcaatgagtgt
gccgacccgaccatctgtattaatggaatatgtgtcaacatccctggaagctatcactgt
aactgccctgcagactttgaactcaaccccactcgggtgggctgtgtagacactcgctct
ggaagctgctacctagatgctcgttctcgaggagacgcatcagagagcttggactgctcc
aatgagatcggagttggtgtttccaaggcatcctgctgctgctccctgggcctgggctgg
ggaaacccttgtgaatcgtgccccttcgtcaactcaactgagtacaagacgctgtgtcct
ggaggagaaggcttcagaccaaaccccatcactgtcatcttggaagacatcaatgagtgc
caggagctgccaggcttgtgccagggaggacagtgcatcaacaccttcggcagcttccag
tgtgaatgtccaagaggctatgccctcaacccagaaaccagagtctgtgaagatatcaat
gagtgtgaacgaccgggtatctgcggcccgggccagtgctacaacaccattggaaactac
acctgtatctgccctgtggactacatgcaggtcaacggcgggaacaactgcatggacatg
aggaagagctactgctacaggaacttttactctgacaacgggacatgtgacggagagctg
aacttcaacatgaccaaaaagatgtgctgctgctcctacaacattggccgtgcatggaat
aaaccctgtgaacagtgtccagtgcccagcaccgacgagtttgtgatcctgtgcggcagt
gtgagaccaggatattacatcgacatcaccactggacgggtcattgatattgatgagtgc
agggaaatcccaggagtgtgcgagaatggagtgtgcatcaacatggttggcagcttcagg
tgtgagtgccccatcggcttcgtctacaacgacaagctgttgatttgcgaagatatcgac
gagtgtcagaatggaccggtgtgccagcagaatgcagcctgtctgaacctgccaggaagc
taccggtgcgagtgcaaacccggatatcgctccacctccaccggacagtgtctcgaccgt
aacgagtgcattgagaaccccggcgtgtgcaacccagggcagtgcatcgacacgctgggg
agctaccgctgcatctgccccaatggcttcaaaccaacgcgggaccagtccatgtgtgtc
gacgtggacgagtgtgagaggcagccctgtggcaacgggacctgtaagaacacagtgggc
tcctacaactgtctctgctacaccggcttccagaactcgcacaacggcgactgcatagat
gtcgatgagtgtgcgacgcagaggggcctgtgtcgaaatgggcagtgtttgaacaccgtg
ggcaacttcctgtgcctctgccaggatggctacgagctcactttagacggcagactgtgt
acagatattaatgaatgtgcagtgaatccaggcacatgtggcgcaggaacctgtctgaat
atggatggctcttacaggtgtatctgcccacctggctacttcctccatgaggaaacctgt
gaagatattgacgagtgctcccagtcgcctgagatgtgtacatttggaacctgctccaac
aacgaaggaagcttcatctgcttgtgcccagaaggcttccaggtctctgcctccggacgc
agatgtttagacatccgcgtgaactactgctataccaagtttgaaaatggccgctgtctg
gccccaaagcctcagaacacttcgaaggcagagtgctgctgcactgggatgccaggtcaa
ggctggggagatccctgtgaaatctgccccaccaagggagaggagggttatcctctcctc
tgtcccaacgagggatatcaacgtgggacagacgaccacccaaaagatattgatgaatgc
ctcaatgacccttgcatcaatggccagtgcatcaacatagatggctcgttccgctgtgaa
tgtcccatggggtaccacctggacatcactagagtcaagtgtgaagacactgatgagtgt
gccattggcaatccctgcggcaacggcacatgcacgaatgtcatcggtggctttgagtgt
gcatgtgacaacggcttcgagcccgggccaatgatgacctgtgaagacatcaatgagtgc
tcccagaatcctttgctgtgcgccttccgctgcattaacgtggttggctcgtaccagtgc
aagtgtcccacaggctacgtgctgcgcgaggacaagaggatgtgtaaagaccagaatgag
tgtgaggacggtatagatgactgcgccagcagaggcatgacctgcaaaaacctgatcggt
acatacatgtgcatctgttcccctggttacacacggcagcccggcggagacggttgcatg
gatctgaatgagtgcacagccaaaccaggtacctgtaagaacggccgttgtgagaacacc
gtgggaagcttccgctgcagatgtgaccaagggttcctcgctaaccccacgcagactgaa
tgtatcgataaccgcgaaggcttctgcttcactgaggttctgaccactctgtgccagatg
acttctagtaacaggaacttggtgaccaagtcagagtgctgctgtgacggaggccgaggc
tggggcaccaactgcgagctgtgtcccctgcccgggaccactcattacaagaagatgtgt
cctctcggacccgggttcaccactgatggcagagatatcgacgagtgtcgtgtgatgggc
aacttgtgcagaaatggacagtgtctcaacactttgggctcctacacctgcaactgcaag
cccggctacagcactgacatcagcagcacactgtgtgtggatgtggatgagtgcatacag
gcaccaaagccttgtaactttatctgtaagaacacagagggaggctacctctgttcctgc
ccccgcggatacatcctacaggaagatggaaagagctgcagagatctggatgagtgttcg
accaaacagcacaactgtcagttcttatgtgtgaacaccatcggagggttcacctgcaaa
tgtccttctggcttcacccagcatcatagtgcctgcattgacaacaacgaatgtgcaacg
gaccctaatctgtgcggctccaaaggtgcctgccagaacactccggggagcttcaattgc
gactgccagcgaggattctcattagattccgacggacaagcctgcgaagatacggatgag
tgcgatggaaaccacaggtgtcagcacggctgtcagaacctggtgggtggatacaggtgc
agctgtccacagggctacttacagcactaccagtggaaccagtgcgtggatgagaacgag
tgcatgaacagccagatctgcgggggagcgtcgtgccacaacaccctggggagcttccgc
tgcctctgccccaccggcttcaactacgagcagacgggcggcggctgctccgacgtcaac
gagtgctccaccagccacaacccctgcaagttcggctgctccaacacggacgggggctac
ctctgtggatgtccatctggatacttccgtgcaggacaagggcactgcgtcacgggtctg
ggcttcaccggcggcgactccggtgctggacagggaggtgaggtggatgataattctctg
tctcccgaggcctgctatgaatgtaagatcaacggctatcccaagaagggacgcaaacgt
cgcagcaccaactcaacgcgggaggaacctctggaagacatgcagctgactgagaaggag
acggtcagcctggccagcgttgacatcgaggacactctgcagttccacttgaacatcagc
gacctgagcaaccgcgaccacatcctggagttcaccccggccttatccaccctcagcgac
cacgtgcgttacagcatcgactacggaaacgaagagggctacttcaagatcaaccagaga
gagggcgtcagcttcctgcacctgagcaggaagaaggccctccccccaggggtgtacgag
cttcagatcagcagcatgcccctctacaggaagaaggagctggctgagctggaggaccgg
cacgataaagactacctcacaggacagctgggggacatactgaagatgagggtgcagatc
atcctccattaa
DBGET
integrated database retrieval system
