Cyclopterus lumpus (lumpfish): 117726290
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Entry
117726290 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: filamin-C-like
KO
K27393
filamin-C
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117726290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117726290
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117726290
Intermediate filaments
Intermediate filament-binding proteins
117726290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
DUF5060
Big_3_5
Invasin_D3
CFSR
Cep192_D4
CH_2
Motif
Other DBs
NCBI-GeneID:
117726290
NCBI-ProteinID:
XP_034382373
LinkDB
All DBs
Position
23:17068405..17142970
Genome browser
AA seq
2704 aa
AA seq
DB search
MMSNSGYLELQLPPQFYQSPADLGEEEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLK
VLNKRINDLQKDLSDGLKLIGLLEVLSQKKMYRKYHSRPNFRQMKLENVSVALEFLEREH
IRLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDAKKLTPKQRLLGWIQN
KVPQLPITNFHRDWRDGKALGALVDNCAPGLCPDWETWDPSQPVENAREAMQQADDWLGV
PQVIAPEEIVDPNVDEHSVMTYLSQFPKSKLKPGAPLRAKTLHPKRAKAYGPGLEPRGNV
VLKPAEFLVETVEAGLGEVLVYVEDPEGHTEEARVIPNNDKNRSYSVVYLPKVEGLHKVK
VLFAGQDIDRSPFMVNVSKAMGDPTRVQARGPGLQQSGNVATKPTYFDIYTAGAGAGDVG
IVIVDSNARRDTVEIVLENKGDSIFRCTYVPVLEGPHTVYVTFAGQQIPRSPFTVHISEA
CNPNACRAAGRGLQLKGLRVKEVAEFKVHTRGAGSGELKVTLMGPKGVEEPVKVLEVEHG
TFECNYYPISTGNHVVSVTWGGHGVPRSPFEVQVSEEAGPQKVRAWGPGLETGLVGKSAD
FVVEAIGTEVGTLGFSIEGPSQAKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKD
SPFMAHVLPATNDVFPEHVNCYGPGLEPLGCIVNKPADFSIDTRGAGPGELKLYAQDAEG
FPIDVQVSESGDGSFCCVYVPTKAIKHTIIITWGQVSAPNSPFRVTIGEGSHPDNVKVYG
PGVEKTGLKANEPTYFTVDCSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTV
KYTPPGAGQYTIMVLFADQEIPISPFRIKVDPSHDAAKVRAEGPGLHQTGVEVGKPTHFT
IYTKGAGKAEPEVHFTGAAKGEAVRDFEIIDNHDYSYTVRYTTVQQGITSITVCHGGDPI
PKSPFNISVAPPLDLSKVKVQGLNNKVDVGKDEEFTVSTRDAGGQGNLDIKITSPSRRPI
PCKLESGSANEVHTVKYIPPEEGQYRVDVSYDGNPVPGSPFTVEGVMPPDPSKVQAYGPG
LQGGVVGKPAPFAIDTKGAGTGGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYAI
NILFADQHIPGSPFKAVVQSPFDPSKVTASGPGLERGKVGEDGSFTVDCSKAGEAELTIE
ITSDSGAKAEVHVQNNGDGTYSITYIPQAHGMYTITIKYGGLAVPEFPGRLLVDPAVDTS
GVKVHGPGVEPRGVLREVTTHFLVDARVHHKSGGSLVKAGVSNPSGVTTDAYVTDKGDGT
YRAEYTAYEDGLHLIEVLFDEVSVPKSPFRVSVTEGCDPSRVRAYGPGLEKGLVNKPNRF
TVETRGAGTGGLGLAIEGPSEAKMFCKDNKDGSCSVEYIPFTPGEYDVNITFGGLPIPGS
PFRVPVQELVDPSKVKCSGPGLGSGVRAHVPQTFTVDSSKAGVAPLEVQLYGPTGVTEPI
SIADNGDGTHTVNYTPAVDGPYTVCVKYADQEVPRSPFKIRTLPAHDASKVRASGPGLNV
SGVPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANIRDNRDGTYTVSYVPDLTGRYT
ITIKYGGDEIPYSPYCINALPTGDASKCLVTVSIGGHGLGSGIGPTIQIGEETVITVDAK
AAGKGKVTCKVSTPDGAELDVDVVENSDGTFDIYYTAPEPGKYVITIRFGGENIPNSPFH
VVATDDPISPVDGMEPGLRPFSLVIPFTVQKGEITGEVRMPSGRTASPHITDNKDGTVTV
KYSPTERGLHEMDIKYDGNHIPGSPLQFYVDAINSGHVTAYGPGLSHGTVNRPATFTIVT
KDAGEGGLSLAVEGPSKAEISCQDNKDGTCTVSYLPTVPGDYNIIVKFDDKHIPGSPFIA
KTTDDESMRTSQLNVGTATDVSLKITETDLSSLTASIRAPSGSEEACLLKRLPNRHIGIS
FTPKEVGEHVVSVKKSGKHVTNSPFKILVGQSEIGDASKVQVYGQGLVEGHTFEVAEFIV
DTRSAGYGGLGLSIEGPSKVDITCEDVEDGTCKVTFCPTEPGSYIISIKFAEQHVPGSPF
TVKVFGEGRMKESITRRRQAPSIATVGSTCDLNLKIPGNWFHLVSAQERLTQTFTRSSHT
YTRTEHTEISQTGAGETKREVLVEESTRVGDPFRAGFPFLGREALGGFSGSRPPPPPPPL
LEGEAGPQEMTGQVTSPGGETEEAQIIKGEDSSYSVRFVPQETGAHTVNVKYRGQHVPGS
PFQFTVGPLGEGGAHKVRAGGTGLDRGLAGVPAEFSIWTREAGAGGLSIAVEGPSKAEIT
FEDRKDGSCGVAFVVQEPGDYEVSIKFNEDHIPDSPFIVPIATQSGDARRLTITSLQEIG
LKVGQEASFAVQLNGARGPIDAKIHTPSGAIEECYITELDSDQHAIRFIPRENGVHSIDV
RFNGSHIPGSPFKIRVGEPGQVGDPGMVSAFGPGLDGGTTGVALEFLVNPCNAGSGALSV
TIDGPSKVKMDCQECPEGYKVSYTPMAPGNYLISIKYGGPQHIVGSPFKAKVSGPRLSGG
HSLHETSSVLVETVSKMAAMGGTFSSLPKFSSDASKVVSRGSGLSKAFVGQKNQFTVDCS
RAGTNMLMVGVHGPKTPCEEVYVKHMGNRMYSVSYTVKEQGSYILIVKWGDENVPGSPFH
FTVS
NT seq
8115 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaacagcggctacttggagctgcagctgccgccgcagttctaccagagcccc
gcggacctcggcgaggaggaggaggagatgccggccaccgagaaagacctggccgaggac
gctccgtggaagaagatccagcagaacaccttcaccaggtggtgtaacgagcacctgaag
gtcctcaacaagcggatcaacgacctgcagaaggacctgagcgacgggctgaagctcatc
gggctgctggaggtgctcagccagaagaagatgtacagaaagtaccactccagacccaac
ttccggcagatgaagctggagaacgtgtccgtggctctggagttcctggagagggaacac
atccgactggtttctatcgactctaaagccatcgtggacgggaacctgaagctgatcctg
ggtctgatctggaccctgatcctgcactactccatctccatgcccatgtgggaagacgag
gacgatgaagacgccaagaaactgacccccaagcagcgtctgcttggctggatccagaac
aaggtgccccagctccccatcaccaacttccaccgagactggagggacggcaaggcactg
ggagcactggtggacaactgtgcccctggtctgtgtccggactgggagacgtgggacccc
agtcagccggtggagaacgccagagaggccatgcagcaggccgacgactggctcggagtc
cctcaggtcatcgctccagaagagatcgtggatcccaacgtggacgagcactccgtgatg
acctacctgtcccagttccccaagtccaagctgaagcccggggcccccctgagggccaag
acgctgcaccccaagagggccaaggcctacggacccggtctcgagccacgagggaacgtg
gtcctgaaaccagcagagttcttggtggagacggtggaggccggactgggagaggtcctg
gtctatgtggaggacccggagggacacacggaggaggcccgagtgatccccaacaacgac
aagaaccggagctactcggtggtctacctgcccaaagtggaggggctccacaaagtgaag
gtgttgtttgctgggcaggacatcgacagaagtccctttatggtgaacgtttccaaggcg
atgggcgacccgacccgggttcaggcccgcggaccgggactgcagcagtcaggaaacgtg
gccaccaaacccacgtacttcgacatttacactgcaggggccggggccggagatgtgggc
atcgtcattgtggactcgaatgctcggagggacacagtggagattgtgttggagaacaaa
ggcgacagtatattccgctgcacctatgtcccggtcctggagggacctcacaccgtctac
gtgacctttgccgggcagcaaattcccagaagccctttcaccgtgcacatctcagaggcc
tgtaaccccaacgcctgccgggcggcgggtcgaggtctgcagctgaagggtctgagggtg
aaggaagtggcagagttcaaagttcacaccagaggagccggcagcggagaactcaaagtc
accttgatgggaccaaagggtgttgaggagccggtgaaggttctcgaggtggaacacggg
acgtttgagtgtaactattaccccatcagtacggggaaccacgtggtgagcgtcacctgg
ggaggacacggcgtgccacgcagtccgtttgaggtgcaggtgagtgaggaggcggggcct
cagaaggtgagggcctggggtccaggtctggagaccggtctcgtggggaagagtgccgac
ttcgtggtggaggccatcggcacggaggtgggaacactgggtttctccatcgagggtcca
tctcaggccaagatcgagtgcgatgataaaggcgacgggtcatgtgatgtgcggtactgg
ccgaccgagccgggcgactatgccgtgcatgtgatctgtgacgacgaggacatcaaggac
agccccttcatggctcacgtcctgcccgccaccaacgacgtcttcccagaacacgtgaac
tgctacggtccaggtctggagccgctgggctgcatcgtcaacaagcccgccgacttcagc
atcgacacccggggagccggcccgggggagctgaagctctatgctcaggacgccgagggg
ttccccatcgacgtccaggtctccgagagcggagacggcagcttctgctgcgtctacgtc
cccaccaaggccatcaagcacaccatcatcatcacctggggccaagtcagcgctcccaac
agccccttcagggtgacgataggagaaggaagccatccagacaatgtgaaggtctacggc
cccggagtggagaagacggggctgaaggccaacgagcccacctacttcacggtggactgc
agcgaggccggacagggtgacgtcagcatcgggatcaagtgcgctccgggcgtggtcggt
ccggcggaggccgacatcgacttcgacatcatcaagaacgacaacgacacgttcacggtg
aagtacacgccgccgggcgccggccagtacaccatcatggtgctgttcgccgaccaggaa
atacccatcagccccttcagaataaaggtggatccttcccatgatgcagctaaagtcaga
gcagaaggacctggactccaccagacaggcgtggaagtggggaagccgacccacttcacc
atttacacaaagggagccgggaaagccgaaccggaggtccacttcaccggagcagcgaaa
ggcgaagcggtccgagacttcgagatcatcgacaaccacgactactcgtacaccgtccgc
tacaccacggtgcagcagggcatcacgtccatcaccgtgtgccacggaggagaccccatc
cccaagagcccctttaacatcagcgtggcccccccgctggacctcagcaaggtcaaagtt
cagggtttgaacaacaaagtggatgttgggaaggacgaggagttcaccgtcagcactcgt
gatgccggaggtcagggaaacctggacatcaagatcacctccccttctcgtcgaccaatc
ccctgcaagctggagtcgggctcggccaatgaagtgcacacggtgaagtacataccccca
gaggaaggacagtacagagtggacgtcagctacgatggaaaccccgtaccaggaagtccg
ttcaccgtggagggcgtcatgccacccgacccctcaaaggtacaagcctacggtccaggt
cttcaggggggtgttgtgggtaaaccggccccctttgccatcgacacaaaaggagctggc
accggtggtctgggcttgacggtggagggaccttgtgaggccaagatcgaatgccaggac
aacggtgacggatcctgctccgtgtcctacttgcccactgagcccggcgagtacgccatc
aacatcctgtttgcagaccagcacatccccggatcccccttcaaggccgtggtgcagtcg
ccgtttgaccccagcaaggtgacagccagcgggccgggcctagagcgaggcaaggttggc
gaggacgggtccttcacagtggactgctcgaaagccggagaagctgaactcaccattgag
atcacctcggactccggagccaaagctgaagtccacgtccagaacaacggtgacgggacc
tactccatcacctacatcccacaggcccacggcatgtacaccatcaccatcaagtacgga
gggctcgccgtgcccgagttccccggcagacttttggtggacccggctgtggacaccagc
ggggtgaaggtccacggacccggagtggaacccagaggcgtcctgagggaagtcacgacc
cacttccttgtggatgcccgggtgcaccacaagagcggcggcagcctcgtcaaagccggc
gtctccaacccttcaggtgtcaccacggacgcctacgtcaccgacaaaggggacgggacc
tacagggcggagtacacggcgtacgaggacggtctacatctgattgaagtgttgtttgat
gaggtctcggtgccgaagagtcccttcagggtgtcggtgacggaaggttgtgaccccagt
cgagtccgagcctacggtccaggtctggagaaaggtctggttaacaagccaaaccgcttc
accgtcgagaccagaggtgctggcactggaggtcttggtttggccattgagggtccatct
gaggcgaagatgttctgtaaggacaacaaagatggcagctgcagtgtggagtacatcccc
ttcactccaggagagtacgatgtcaacatcacctttggaggccttcctatcccagggagc
ccatttcgggtcccagtgcaagagttggtggatcccagtaaagtgaagtgttcaggtccc
ggattgggaagtggagtccgagcccacgtccctcagaccttcactgtggacagcagtaag
gcaggggtggcccccctggaggtccagctgtacgggcccacaggtgttaccgagccaatc
agcatcgccgacaacggagacggcactcacaccgtcaactacactcctgctgtagacggc
ccgtacacggtgtgtgtgaaatacgctgaccaggaggtccctcgcagtccttttaagatc
aggacgttaccggctcatgatgccagtaaagtccgagccagcggtccaggtctgaatgtg
tccggagttccagccagtctgccggtggagttcaccatcgacgccagagacgccggagag
ggactgctcaccgttcagatactggacccggaggggaagcccaagaaggcgaacatccgg
gacaaccgggacgggacgtacacggtgtcctacgtcccggacctgacgggccgctacacc
atcaccatcaagtacggaggggacgagatcccatactcaccgtactgcatcaacgccctg
cccaccggggacgccagcaagtgcctggtcacagtgtcgatcgggggacacggactggga
tcaggtatcggcccgaccatccagatcggagaggagacggtcatcactgtggatgcaaag
gctgctgggaaaggcaaagtgacctgcaaggtgtcaactcctgacggggcggagctggac
gtggacgtggtggagaactccgacggcacgtttgacatttactacacggctccggaaccc
gggaagtacgtcatcaccatccggttcggaggggagaacatccccaacagccccttccat
gtggtggccaccgatgaccccatcagccctgtggatgggatggagccggggctccgcccc
ttcagcctggtcattcccttcactgtgcagaaaggagagatcacaggtgaagtgcgaatg
ccgtccggtcgcactgcgagtcctcacatcaccgacaacaaggacggcaccgtcaccgtc
aaatactccccgacggagcgaggcctgcacgagatggacatcaaatacgatggaaaccac
atcccaggaagtccacttcagttctacgtggatgccattaacagtggtcatgtgacggcg
tacggccccggcctgagtcacggcacggtgaaccgaccggccaccttcaccatcgtgacc
aaagacgccggagaagggggtctgtctctggctgtggagggtccatccaaagctgagatc
agctgtcaagacaacaaagacgggacctgcaccgtgtcctacctgcccaccgtccccgga
gactacaacatcatcgtcaagtttgatgacaagcacatccccggcagccccttcatcgcc
aagaccaccgatgacgagtccatgaggacgtctcagctcaacgtcggcacggcaacagac
gtttccttgaagatcacagagacggacctgagcagcctgacggcgagcatcagggcgcca
tcgggcagcgaggaggcgtgtctgctgaagaggcttcccaacagacacatcggtatctcg
ttcacgccgaaggaagtgggcgagcacgtggtgagcgtgaagaagagcggcaagcacgtg
accaacagccccttcaagatcctggtcggccagtcagagattggggacgccagcaaggtg
caggtctacggccagggactggtggaggggcacacctttgaggtggccgagttcattgta
gacaccaggagcgcaggctacgggggtctgggcctgtccatcgagggtcccagtaaggtg
gacatcacttgtgaggacgtggaggacgggacctgtaaagtcaccttctgccccaccgag
ccggggagctacatcatcagcatcaagttcgccgagcagcacgtccccggaagtccgttc
accgtgaaggtgtttggagaaggaaggatgaaggagagcatcaccaggaggcgccaggct
ccctccatcgctacagtgggcagcacctgtgacctcaacctcaagataccagggaactgg
ttccacctggtctcggcccaggagcggctgacccagaccttcacccgcagcagccacact
tacacccggacggagcacacagagatcagccagacgggggccggggagacgaagagggag
gtgctggtggaggagagcacccgggtgggggaccccttcagggccgggttccccttcctg
gggagggaggcgctgggcggcttcagcggcagccggccgcctcctcctcccccccctctg
ctggaaggtgaggcgggcccccaggagatgaccggccaggtgacgagtccaggaggagag
acggaggaggcgcagatcatcaaaggggaggacagctcctacagcgtccgcttcgtccct
caggagacgggcgctcacacggtgaacgtgaagtaccgcggccagcacgtccccgggagc
cccttccagttcaccgtggggcccctgggggaggggggggcccacaaggtccgagcagga
ggcaccgggctggaccgaggattggcgggggtcccagctgagttcagcatctggaccaga
gaggctggagcaggaggcctgtccatcgccgtggagggacccagtaaggctgagatcacc
ttcgaagaccggaaggacggatcctgtggagtcgcctttgtggtccaggagcctggagac
tacgaggtttctatcaagttcaacgaggatcacatcccagactctccgttcattgtgccc
atcgcaacccaatctggagacgcccgacgcctcaccatcaccagcctgcaggagataggg
ctgaaggtggggcaggaggcctccttcgctgtgcagctgaatggagccagagggccaatt
gatgctaaaatccacacgccgtcaggagccatcgaggagtgttacatcacggagctggac
agtgaccagcatgctatcaggttcatccccagagaaaacggagttcattccatcgacgtt
cgtttcaacggcagccacatccccggcagtcccttcaagatccgggtgggagaaccagga
caggtaggcgatcctggcatggtgtccgcctttggaccgggcctggacggaggaacaaca
ggtgtagcgttggagttccttgttaacccttgtaatgctggatcaggagctctgtctgtg
accatcgacggaccctcaaaggtgaagatggactgccaggagtgtccagagggctacaag
gtgtcctacacacccatggctcctgggaactacctgatctccataaagtatggcggcccc
cagcacattgtagggagtcccttcaaagccaaagtctcaggacctcgtctgtccggcgga
cacagtctgcacgagacctcctctgttctcgtggaaacggtctccaagatggccgcaatg
ggaggcaccttcagctccttacccaagttctcctccgacgccagcaaagtggtctccaga
ggttcgggtctatccaaggcctttgtgggccagaagaaccagttcacagtggattgcagc
agagcaggcaccaacatgctgatggtgggcgtccacgggccaaagacgccctgcgaggag
gtgtacgtcaagcacatgggcaaccggatgtacagcgtcagctacaccgtgaaggagcag
ggcagctacatcctcatcgtcaagtggggggacgagaacgtccccggcagtccgttccac
ttcaccgtctcctaa
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integrated database retrieval system
