Cyclopterus lumpus (lumpfish): 117727111
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Entry
117727111 CDS
T09199
Symbol
actc1a
Name
(RefSeq) actin, alpha cardiac muscle 1a
KO
K12314
actin, alpha cardiac muscle
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04260
Cardiac muscle contraction
clum04261
Adrenergic signaling in cardiomyocytes
clum04814
Motor proteins
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117727111 (actc1a)
04820 Cytoskeleton in muscle cells
117727111 (actc1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117727111 (actc1a)
04261 Adrenergic signaling in cardiomyocytes
117727111 (actc1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117727111 (actc1a)
04147 Exosome [BR:
clum04147
]
117727111 (actc1a)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
117727111 (actc1a)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117727111 (actc1a)
Exosomal proteins of bladder cancer cells
117727111 (actc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
117727111
NCBI-ProteinID:
XP_034383062
Ensembl:
ENSCLMG00005022783
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All DBs
Position
24:complement(15527402..15532028)
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AA seq
377 aa
AA seq
DB search
MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgacgacgagaccaccgccctcgtgtgcgacaacggctctggcctggtcaag
gctgggttcgccggtgatgacgctccccgtgctgtcttcccttccattgttggacgcccc
cgtcaccagggtgtgatggtgggtatgggtcagaaggacagctatgtgggagacgaggcc
cagagcaagcgtggtatcctgactctgaagtaccccatcgagcacggcatcatcaccaac
tgggacgacatggagaagatctggcaccacaccttctacaatgagctccgtgtggcccca
gaggagcatcccaccctgctgactgaggcccccctcaaccccaaggccaacagggaaaag
atgacccagatcatgtttgagaccttcaacgtccctgccatgtacgtggctattcaggcc
gtgctgtccctctacgcctctggtcgtaccaccggtattgtgctggactctggtgatggt
gtgacccacaatgtgcccatctatgagggttatgctttgccccacgccatcatgcgtctg
gatctggccggtcgcgacctgactgactacctgatgaagatcctgactgagcgtggctac
tccttcgtcaccactgctgagcgtgagatcgtgcgtgacatcaaggagaagctgtgctac
gttgcactggactttgagaacgagatggccaccgccgcctcttcctcctctctggagaag
agctacgagctgcccgacggtcaggtcatcaccattggcaacgagcgtttccgctgcccc
gagaccctgttccagccctccttcatcggcatggagtctgctggtatccatgagactgca
tacaacagcatcatgaagtgcgacattgatatccgcaaggacctgtacgccaacaatgtg
ctgtccggtggaaccaccatgtaccctggtattgctgaccgcatgcagaaggagatcacc
gccctggcccccagcaccatgaagatcaagatcatcgctccccctgagaggaaatactcc
gtctggatcggcggctccatcttggcttccctttccaccttccagcagatgtggatcagc
aagcaggaatacgatgaggcgggcccctccatcgtgcacaggaagtgtttctaa
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integrated database retrieval system