Cyclopterus lumpus (lumpfish): 117727212
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Entry
117727212 CDS
T09199
Symbol
tshr
Name
(RefSeq) thyrotropin receptor
KO
K04249
thyrotropin receptor
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117727212 (tshr)
04081 Hormone signaling
117727212 (tshr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
clum04030
]
117727212 (tshr)
G protein-coupled receptors [BR:
clum04030
]
Rhodopsin family
Peptide
Thyrotropin
117727212 (tshr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
Comm
DUF7377
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
117727212
NCBI-ProteinID:
XP_034383252
Ensembl:
ENSCLMG00005006104
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Position
24:complement(19900686..19918837)
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AA seq
777 aa
AA seq
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MQVITCALFTLASLPLSAGLEADSCPAVCECSEWKTHTISCFDIAVLPRFPGSTETLWLF
ETRLSSVPTDAFANMVNISRIYISVDVTLQKLERHSFYNLKKITHIELRNAKSLSYIDPE
AFKNLPNLKYLGIFNTGLSVFPDLSNIHSNDMNFILEVVDHPFITEIPANSFRGITSDVL
TVMLYGNGFREIQHHAFNGTKLDQVDLHRNKYLTKMDEKAFAGTISGPMLLDVSLTGITS
LPTTGVDSLRELKARDAWALKKLPPIKTFKHLTIANLTYPSHCCGFKNLKKKRGFLEYLI
CNLTAFYDQHHKRSVGPLGIPSLQGDVVEETIPDEDPNDGNHRESQDWRRGDFHGSLHYH
AYFGGQPDEDVGFGETLKNPQEDTSQDFNSRYDYVVCEEGEEVACAPVPDEFNPCEDIMG
FGFLRVSVWFVSLLAVLGNMVVLLVLLTSHYKLSVSRFLMCHLAFADLCMGIYLLLIASV
DLHTRAEYFNHAIDWQTGPGCGLAGFFTVFASELSVYTLTVITLERWYAITFAMRLDRKL
RLHHAAVVMLGGWIFCLLLALLPLIGVSSYQKVSICLPMDTQSTVAQVYILSVLVLNILA
FLVICACYFKIYCTVHNPHYRSGSKDTNIAKRMAVLIFTDFLCMAPISFYAMSAALDRPL
ITVSNSKILLVLFYPLNSCANPFLYAIFTKAFRGDIFILLSKVGLCQQRAQLFRGQTVSS
KGSSATSQNRKDKDRVKKVGNGGQEEVPIHLKKCFGQTDHQAVCQLTSPEESQSLNT
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgataacatgcgcgttgtttacgctcgccagtctccctctcagcgccgggttg
gaggccgactcctgccctgctgtctgcgagtgctctgagtggaagacgcacacgatctcc
tgctttgacatcgctgttctcccccggttccctggcagcacggagacactatggcttttc
gagacccgtctgtcatcggtgccaacagatgcctttgccaacatggtcaacatctccagg
atatatatatcagtggatgtgacgctgcagaagctggagaggcactccttctacaacctg
aagaaaatcacccatatagagttacgtaacgcaaaaagtctgagctacattgacccagaa
gcctttaaaaatctcccaaacctcaaatacttgggaattttcaataccggcctttctgtc
ttccctgacttgagcaacatccactctaatgacatgaacttcatactggaggttgttgat
catcccttcatcacggagattccagccaactcattccgtggcataaccagcgacgtgctg
acagtgatgctgtatggaaatggcttcagagaaatccaacaccatgccttcaatgggacc
aagctagatcaagtagaccttcacaggaataagtatcttaccaagatggatgaaaaggct
tttgcgggcaccatcagcggtcccatgcttctagacgtgtccctaacagggatcacctcc
ctgccgaccacaggtgttgattctctccgggagctgaaggcacgcgatgcctgggccctc
aagaaacttccacccatcaaaaccttcaagcacctcaccattgccaacctcacctacccc
agccactgctgcggcttcaaaaacctaaaaaaaaaacgagggtttttggagtacctcatc
tgtaacttgactgcgttctatgatcagcatcacaagcgttctgtagggccccttggcatc
ccttccctccaaggggacgttgtggaggaaacaatcccagatgaggatccaaatgacgga
aaccacagagagtcccaagactggaggagaggtgacttccatggaagcctccactaccac
gcctactttgggggccagccagatgaggatgtgggttttggagagaccctcaagaacccc
caggaggacaccagccaagactttaacagtcgttatgattatgtggtgtgtgaggaggga
gaggaggtggcatgtgcaccagtgcctgatgagttcaatccttgtgaggacataatgggt
tttggcttcttgcgagtgtctgtgtggtttgtgagtctgctggctgttctgggaaatatg
gtggtgctgctggtgctgctcaccagccactacaagctctcggtctcccgcttcctcatg
tgtcacctggcttttgcagatctgtgcatggggatttatctgctgcttatcgcctctgta
gacctccacacacgagccgagtacttcaaccacgccatagattggcagacgggccctggc
tgtggacttgcaggtttttttacagtcttcgcaagcgaactgtcagtctacactttgacg
gtgatcactctggagaggtggtatgctatcacctttgctatgcggctagatcgtaagctg
cgtctgcaccatgcggcagtcgtgatgctaggcggctggatcttctgcctcctactggcc
ctgctcccactgattggggtgagcagttaccagaaggtcagcatctgtctccccatggac
actcagtccactgtggctcaggtctacatcttgtcagtgctggtcctcaacatcctagcc
tttcttgttatctgtgcttgctacttcaagatctactgtacagttcacaaccctcactac
cgttctggatccaaggataccaacatcgccaagcgcatggctgtcctcatctttactgac
ttcttgtgtatggcgcctatctccttctacgccatgtcggctgcgctggaccggccgctc
atcaccgtctccaactccaagattttattggtgctcttctacccgctcaattcctgtgcc
aacccgttcctctatgccatcttcacgaaagctttcaggggggacatattcatcctcctc
agtaaggtgggcctttgtcagcagcgagcacagctgttcagaggccagacggtctcgtca
aagggcagtagcgcaacatctcagaatcgtaaagacaaggatagggttaagaaagttgga
aacggaggccaggaagaagtgcccatccacctgaagaagtgcttcggtcaaaccgaccac
caagcagtctgccagctgacaagtcctgaagagagccagagcctgaacacgtga
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