Cyclopterus lumpus (lumpfish): 117727382
Help
Entry
117727382 CDS
T09199
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum02010
ABC transporters
clum04146
Peroxisome
clum04977
Vitamin digestion and absorption
clum04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117727382 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117727382 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
117727382 (abcd4)
04980 Cobalamin transport and metabolism
117727382 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117727382 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117727382 (abcd4)
Enzymes [BR:
clum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
117727382 (abcd4)
Membrane trafficking [BR:
clum04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117727382 (abcd4)
Transporters [BR:
clum02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
117727382 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
DEAD
AAA_7
FtsK_SpoIIIE
AAA_5
NACHT
AAA_29
T2SSE
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
117727382
NCBI-ProteinID:
XP_034383552
Ensembl:
ENSCLMG00005019603
UniProt:
A0A8C3AIC3
LinkDB
All DBs
Position
24:complement(7915121..7923696)
Genome browser
AA seq
616 aa
AA seq
DB search
MPRVEKSNSRGTKRPKLDWTFVQRFCSIQKVLFPSWTSQSALMFGTLLVVTLTEQLIIYQ
VGVLPSHFYSVLADKDYSGFQSLVGTAMVLILLNSTLKSIDQYICNRMYVSWRRMLTESL
HTSYFQGRVYYTLNVLRGEIDNPDQRISQDAERLCKQMSTMASRLIVSPFTLAYYSYHCF
YSTGWIGPVSIFGYFVIGTIANKILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFY
RAGKVEHMRTDRRLQTLLETQKSLINKELWLYIGVNTFDYLGGYLSYIIIAIPIFTGIYD
GLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRIGELREVMDDILRKQC
DYDPASGESYDFDSDFNVHAGPADTAFILDHLSYKSPYSDKLLVEDLSLKISQGTNLLVV
GNTGTGKTSLLRVLNRLWEAHSGFVHMTTCFGPRGTLFLPQKPYLTDGTLREQVIYPLKD
IYPASGSVDDDRIIQFLELAGLPSLLKRTGGLDEKVDWNWYDVLSPGEMQRLCFARLFYL
QPKYAVLDEATSALTEEAEAQLYRTCKRLGMTLVSLGHRSSLEKYHDVQLKLCGGGLWEL
TKLKGGTRSLEEEEEP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgtggaaaagtcaaatagcagagggaccaaaagacctaaattagactggacg
tttgttcagaggttctgcagcattcagaaggtcctgttcccatcatggaccagtcaaagt
gccctgatgtttgggacgctgctcgtggtcactctcacagagcagctaatcatttaccaa
gtgggtgtcctcccgagccacttctacagcgtgctggcagacaaagattactctggtttc
cagagtctggtgggcacagcgatggtgctcatcttgctcaactccacattgaaaagtatc
gaccagtacatttgcaatcggatgtatgttagctggaggaggatgctaacggagagcctc
catacgtcctacttccagggccgagtctattacacactcaatgttctcagaggggaaata
gacaatccagaccagcgaatcagtcaggacgcagagcggttgtgtaagcagatgagcacc
atggcgagtcgtttgattgtgtccccgttcacgctggcttactacagctaccactgcttc
tatagcaccggctggattggccctgtgagtatctttggctactttgtgatcgggaccatt
gccaataaaatcctcatggggcctattgtgtcgactctgtttgagcaagaaaaactggag
ggcgacttcagatttaagcacatgcaaatccgtgtcaatgcagagtctgcagctttttat
agagccggtaaagtggagcacatgaggaccgaccgcagactgcagactctgttagaaact
cagaagagtctaataaacaaagagctctggctttatatcggggtaaacacatttgactac
cttggaggttacctcagctacattatcatcgccatcccaatcttcactggtatctatgat
ggtctcactcctggggagctcagtgcactcatcagtaagaacgcctttgtgtgcatctac
ttgataaatggcttcacgcagctaatagacctgtcaaccactctgtccgatgtggctgga
tacacccacaggattggggagctgagggaggtgatggatgacatcctacgcaagcagtgt
gactatgacccggcatcaggggaaagctacgactttgacagtgacttcaacgtccatgcg
ggccctgcggacactgccttcatcctggaccatctttcatacaaatctccttactcagac
aagttgctggtggaggatctgagtctgaaaatcagccagggaacaaatctactggtggtg
gggaacacgggcaccggcaagacgtcactactgagggtcctcaaccgactctgggaggca
cacagcggttttgtccacatgaccacatgtttcgggcccagaggaaccctcttcctgcca
cagaaaccttacctgactgatggcacactgcgggaacaggttatctacccattgaaggat
atttaccctgcatcagggtcagtggacgatgacagaattatacaattcctggaactagct
ggactgcccagtctcctgaagcggacgggcgggctggatgaaaaagtggactggaactgg
tatgatgttctgtctccgggtgaaatgcagcgtctctgctttgctcgtctcttctacctg
cagcccaaatatgcagtgttggacgaggccaccagtgctctgacggaggaggcagaagct
cagctgtaccggacctgtaaacggctcggcatgactttggtcagtctgggacatcgcagc
agcctggagaagtaccatgatgtccagttgaagctatgtggaggaggcctgtgggagtta
accaagttaaaaggaggcaccaggagcctcgaagaagaagaagaaccgtga
DBGET
integrated database retrieval system
