Cyclopterus lumpus (lumpfish): 117727475
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Entry
117727475 CDS
T09199
Name
(RefSeq) thrombomodulin-like
KO
K03907
thrombomodulin
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
clum04090
]
117727475
00535 Proteoglycans [BR:
clum00535
]
117727475
04091 Lectins [BR:
clum04091
]
117727475
CD molecules [BR:
clum04090
]
Proteins
117727475
Proteoglycans [BR:
clum00535
]
Cell surface proteoglycans
Others
117727475
Lectins [BR:
clum04091
]
C-Type lectins
Others
117727475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
EGF_CA
Lectin_C
THBD
EGF_Tme5
EGF
Plasmod_Pvs28
hEGF
EGF_3
Syndecan
Motif
Other DBs
NCBI-GeneID:
117727475
NCBI-ProteinID:
XP_034383705
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All DBs
Position
24:18278221..18280172
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AA seq
576 aa
AA seq
DB search
MNDMFSQTNKPIHGRGVRQYKREQRGSNMGDVTGLFVFLLTFLVGRTDGIEPSSGYCIGT
QCFTVFHHASDFTAAQDRCRDQGGHLMTVRSSVSHDILSILLGNLTGRYWVGLHLATGCP
DSAAELRGFTWVTEDSESDFFNWPPGLDSSCSSPRCVSVSQEDEFQWIPEPCREHLAGFL
CEYSFSDPCKGLAVAPGESVTYRTPMGFVGEDVLSLPPGSTAVRMPAETKYVCFTEQWLQ
APWSCEIHEGGCEYRCAANPKNEPVCFCPTGQTVNPKNNVTCEVTDADDPCAALRCAHAC
YRDGDSHACLCGHGFKLAQDGRSCVDVNDCGDKRQCPGENFMCVNSVGGFQCVCEDGYMA
RGGLCLEVDECVSAPCEHICANTPGSYDCSCYDGYKEDPKSPNKCVLHCGKEECVAECDP
NNRYECYCPDGYVASGETQVVCIDMDECSFEQCDQRCKNTFGSYVCSCFPGYTLVGEVTC
VHTEGDTDGGSEGSGEGTTPSVPTTSAAPPPDPTRRPSAVSAGGLAGIIVCTVFSILLVL
FLAHRILNGRGKMESRGALKAAEEEAHGLQRVTRDA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatatgttttctcaaacaaacaaacctatacacggccggggcgtgcgacaatat
aaacgggagcagcgaggttcaaacatgggggacgtaacgggactatttgttttcttgttg
actttcctggtggggcgaaccgacgggatagagccgagcagcgggtactgcatcgggacc
cagtgcttcactgtgttccatcacgccagcgactttacagccgcgcaggaccgatgtaga
gaccagggaggacatttgatgaccgtgcggtcgtctgtctcccacgacattctctccatc
ctgttggggaacttgacggggcggtactgggtcggtctacatctggcgaccggctgcccg
gactctgctgctgagctgaggggcttcacgtgggtgaccgaggacagcgaaagtgacttc
ttcaactggccgccgggtcttgacagcagctgttcctccccgcgctgcgtctcggtttcc
caagaggacgagtttcaatggatccccgaaccgtgtcgcgaacacttggccgggttcctc
tgtgagtacagcttcagtgacccgtgcaaaggacttgcggtcgcgccgggcgagtccgtc
acctacaggacccccatggggtttgtgggcgaggatgtactttctttgccccccgggagc
accgccgtccggatgccggccgagaccaaatacgtctgcttcacggagcagtggctgcag
gcaccctggagctgcgagattcacgagggcgggtgtgagtacaggtgcgcggcgaacccc
aaaaacgagcccgtctgcttctgcccgacgggccagaccgtcaacccaaagaacaacgtc
acctgcgaggtgacggacgcggacgacccgtgcgcggccctgcgctgcgcgcacgcctgc
tacagggatggagactcccacgcctgcctgtgcggccacggctttaagctggcgcaggac
ggccggtcgtgcgtggacgtcaacgactgcggggacaagcggcagtgtcccggggagaac
ttcatgtgcgtcaacagcgtcggcgggttccagtgcgtctgcgaggatggatacatggcg
cgcggcggcctgtgcctcgaggtggacgagtgcgtgtccgctccgtgcgagcacatttgc
gccaacactcccggcagctacgactgctcttgttatgacggatacaaagaggacccgaag
tccccgaataagtgtgtgctccactgcgggaaggaggagtgcgtcgccgagtgcgaccca
aacaaccgatacgagtgctactgccccgacgggtacgtggcatcgggggagacgcaggtc
gtctgcatagacatggacgagtgctccttcgaacaatgcgatcagcgttgcaaaaacacg
ttcggcagctacgtgtgctcgtgctttccgggatacactttagtcggagaggtcacttgt
gtccacaccgagggggacacggacggagggtcggagggctccggagagggcacgaccccg
agcgtccccacgacatccgccgcgccgcctccggatccgacgaggcggccctcggcggtg
tcggcggggggtctcgcggggatcatagtgtgcactgtgttctccatcttgctggtgctg
tttctggctcatcgcatcctcaacggcagagggaagatggagagccgcggcgcgctcaaa
gccgcggaggaggaagcccacggtttacagcgcgtgacgagggacgcttaa
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