Cyclopterus lumpus (lumpfish): 117728779
Help
Entry
117728779 CDS
T09199
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117728779 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117728779 (mmp2)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
117728779 (mmp2)
Peptidases and inhibitors [BR:
clum01002
]
Metallo peptidases
Family M10
117728779 (mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
117728779
NCBI-ProteinID:
XP_034385519
Ensembl:
ENSCLMG00005008734
UniProt:
A0A8C2Z3C7
LinkDB
All DBs
Position
3:complement(21845700..21862248)
Genome browser
AA seq
658 aa
AA seq
DB search
MAFPTLFSCNRIVLKVFMIQFIAFQATYAAPSPIIRFPGDDTSPTTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFNLQETGEIDAKTVDIMKKPRCGVPDVANYNFFHRKPLW
QKKDITYRILGYTPDLDEEVINDAFFRAFKVWSDVTPLTITRIMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGDGQVVKVKYGNADGEFCKFPFLF
MGTEYNSCTPQGRDDGFLWCSTSYNFDDDGKYGFCPHELLFTIGGNAEGAPCKFPFTFQG
EKYDACTTQGRDDGYRWCATTEDYDQDKTFAFCPETAMSTVGGNSEGSPCVFPFTFLGDT
YESCTSSGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPIYTYTKDFRLPEDDIKGIQELYGVPTDKPLPPTQGPVTPMDICKEPVVFDAVSQIR
GETFFFKDRFLFRSVNFRSKPSGPLLVATYWPDLPTKIDAAYENPVEEKTVFFSGNEMWV
YKADELEKGYPKRLSSLELPTDLQQIDAAFNFRKNKKTYFFAGDKFWRYNEDTKKMDPGF
PKLIADSWNGIPDGIDSSFNLNGIDYSYFFKGNHYFKLEDSSLKIVKLGEITKDWLGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcctttccgacgttatttagctgtaatcggattgttctcaaagtgtttatgattcag
ttcatcgcctttcaagcaacgtatgctgccccttcgcctattatcaggtttcctggagac
gataccagtccaacaacagacaaagaagttgctctgcactatctgaataagttctatgga
tgcccacaagacagatgtaaccttatggtgctcaaggacaccctgaagaaaatgcaaaag
ttcttcaatctgcaagaaaccggagagattgatgccaaaactgtggatatcatgaaaaag
ccccgctgtggcgtcccagatgtggccaattacaacttcttccacaggaaacccttgtgg
cagaagaaagacatcacttacagaatcctcggatacactcccgacctggatgaagaagtg
ataaatgatgctttcttcagagccttcaaagtgtggagcgacgtcaccccactcacaatc
acccgcatcatggacggagaggctgacatcatgattaactttggccgcaatgagcacgga
gacggttaccccttcgacggcaaagatggcctcttggctcatgcctttgctccagggcca
ggaattgggggagattcccactttgatgatgatgagcagtggacgctgggagacggccaa
gtggtgaaggtgaagtacggcaatgctgatggggagttctgtaagttccccttcctgttc
atgggcactgagtacaacagctgtacacctcagggccgtgacgacggcttcctgtggtgc
tccaccagctacaacttcgacgatgacggcaaatatggcttctgcccccatgaattacta
tttaccattggtggaaatgcagaaggcgctccatgtaaattccccttcacctttcaggga
gagaagtatgacgcatgcaccactcaaggcagggatgatggttaccgctggtgtgccacc
actgaggactacgaccaggacaaaacctttgcgttctgccctgaaactgccatgtcgaca
gtgggagggaactcagagggaagcccctgtgtcttccccttcaccttcctgggtgacacc
tacgagtcctgcacctcatctggacgcagcgatggcaagatgtggtgcgctagcaccaag
agctatgatgatgaccgcaaatggggtttctgtccagaccaaggttacagtttgttcctg
gtggcagcccatgagtttggtcatgcccttggcttggagcactctcaggaccccggagca
ttgatggcccccatttacacttacactaaagacttcagacttcctgaggatgacatcaaa
ggcatccaggagctctacggtgtgccaaccgacaaacctttgcctccaacccagggtcca
gttactccaatggacatctgtaaagagccagttgtgtttgatgctgtatcccagatcaga
ggagagaccttcttcttcaaggacaggttcctgttcaggtcagtcaatttcagaagcaag
cccagcggccctctgctggtcgccacctactggccagacctccctaccaagatagacgct
gcctatgaaaacccagtggaggaaaaaaccgtcttcttctcaggcaacgagatgtgggtc
tacaaagcagatgagttggagaaaggctatcccaagaggctctcaagccttgaactcccc
actgatctgcaacaaatcgacgctgccttcaactttaggaagaacaagaagacttacttt
tttgctggggacaaattctggagatacaatgaagatacgaagaaaatggaccctggcttc
cccaaacttattgcagattcctggaatggcatcccagatggcatcgactcttccttcaat
ctcaatggcattgattacagctacttcttcaaaggcaaccactatttcaaactggaagac
agcagcttgaagattgtcaagttgggtgaaatcacgaaggactggctcggttgttga
DBGET
integrated database retrieval system
