Cyclopterus lumpus (lumpfish): 117729148
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Entry
117729148 CDS
T09199
Symbol
tcf3b
Name
(RefSeq) transcription factor 3b isoform X1
KO
K09063
transcription factor E2-alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117729148 (tcf3b)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
117729148 (tcf3b)
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GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
117729148
NCBI-ProteinID:
XP_034385798
Ensembl:
ENSCLMG00005016927
ENSCLMG00005016989
LinkDB
All DBs
Position
4:22216545..22248291
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AA seq
637 aa
AA seq
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MNEQQQRMAAVGTDKELNDLLDFSAMFAPPVANGKNRTMTLASSQFGGSAIDERSGSGSW
GSAEQNSPSFSQGRGYGEGSHYNEHEGLSSPFISAGVAGKNERPPYPPFVSQPGFLPSDI
AMPSPDAMSPSGLKSGSQFYPSYPNNPRRRPPDGGIETQPKKIRKPPGLPSSVYASTSGD
EYVRDNGGYPGAKPGAVYPFYMQEDPWSSSGYSAMLGNSPHIGQPGSFSAINPQDRMKRQ
PLPLSPQNYPLHGSEVNGFHSAPTTYNHTPAINGENIMANRGTTAGSSGDEIGKALASIY
PSDHNSNNFPSAPSTPGSPQAIAGAQSQWQRPTTPNYEGQPHALSKMEDRLEEAIHVLRS
HAVGQGLEGAPDIHSLLSAVHNGGLGGLSPAFPNASLALSNRHPAMQGGKHEEPTGLPPS
STLLHGHHASGPTPPVGQPEGFTSLPGLARSTHSSSGSDIKREDKEDDDNSSVGDKSDDE
KKDSKAAHLRRKEALTLQMLASLSDQKDDSLDEEEDDEDLPPEVKLEREKERRVANNARE
RLRVRDINEAFKELGRMCQLHLSHDKPQTKLLILHQAVNVILNLEQQVRERNLNPKAACL
KRREEEKVSGVVGEAPMQLSGGHPSMGGEGHNPAGHM
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacagcagcaaagaatggctgcagtgggaactgacaaggaactcaacgacctc
ctggatttcagtgcgatgttcgcgcctccagtagccaatgggaagaacaggacaatgaca
ctcgccagcagtcagtttgggggatcagcaatagacgagcgcagcggctctgggtcttgg
ggctcagcagaacagaacagcccctctttcagccaaggacggggctatggagaaggatcc
cactacaatgagcatgaaggcttgtcctctccgtttatcagtgcaggggttgcaggtaaa
aatgagaggccaccataccctccctttgtaagccagcctggttttcttcctagcgacata
gcgatgcccagcccagatgccatgtccccctctggccttaaatctggctcccagttttac
ccgtcatacccaaacaacccaaggagaaggccgcctgatggaggcatagaaacacagcca
aagaagattcggaaaccccctggcctgccgtcctcggtgtatgcttccacatctggtgat
gagtatgtaagagacaacggaggatatcctggtgctaagcctggagctgtctaccctttc
tatatgcaagaagacccctggtcgtcctctggctactctgccatgctgggtaactctcct
cacattggacagccgggctccttctctgcaattaacccacaggacaggatgaagcgtcaa
cccctgcctctgtccccacagaactatcctctgcacggcagcgaagtcaatggcttccac
tccgcccccaccacctacaaccacactcccgccatcaacggagaaaacatcatggccaac
cgaggcaccacagctggcagttcaggagatgaaattgggaaggcacttgcctcgatttac
ccgtcagaccacaatagtaataacttcccctccgctccatctactcctggatctcctcag
gctattgcaggagcacagtctcagtggcaaagaccaaccacacccaactatgaagggcaa
ccacacgcactgagtaaaatggaggaccgtttggaggaggccatccatgtactgcgtagc
cacgctgtgggtcagggtctcgagggcgcccccgacattcacagcttgctgtccgccgtg
cacaatgggggccttgggggcctctctccagcgttcccaaatgcaagccttgccctcagc
aacagacatcctgcaatgcagggagggaaacacgaggagcccacaggccttccccccagc
agcactcttctgcacggccatcacgcatccggacccacaccaccagttggccaaccggag
ggcttcaccagtctccctggtttggcccgctccacgcactcctctagcggctcagacatc
aaaagagaagataaagaggacgacgacaactcatctgttggagacaaatcggacgacgaa
aagaaggactccaaggcagcacaccttcgacgaaaggaggcgttgaccctccagatgctc
gctagcctttcagaccagaaggatgatagtctagatgaggaggaagatgacgaggacctt
ccccctgaggtgaagctggaacgcgagaaggagcggcgagtggctaacaatgcccgcgag
cgcctcagagtacgggacatcaacgaggcatttaaggagctggggaggatgtgccagctg
cacctaagccatgacaaacctcagaccaaactcctcatcctgcaccaagctgtcaacgtc
atcctcaatttagaacagcaagtcagagagcgtaaccttaaccccaaggcagcgtgttta
aaacgccgtgaggaggagaaggtgtctggggtggtgggtgaagcgcccatgcagctctca
ggaggccatcctagtatgggaggagaaggccacaacccagctggccacatgtaa
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