Cyclopterus lumpus (lumpfish): 117729936
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Entry
117729936 CDS
T09199
Symbol
nrl
Name
(RefSeq) neural retina-specific leucine zipper protein
KO
K07595
transcription factor MAFA
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117729936 (nrl)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Maf
117729936 (nrl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_Maf
KASH_CCD
bZIP_2
bZIP_1
Maf_N
Prp19
Motif
Other DBs
NCBI-GeneID:
117729936
NCBI-ProteinID:
XP_034387240
Ensembl:
ENSCLMG00005000606
LinkDB
All DBs
Position
4:complement(24644478..24650102)
Genome browser
AA seq
424 aa
AA seq
DB search
PMSSLPPSPLAMEYLNDFDLLKFEVKPDTPPLPLYPKSGLPHDPSSSPYTEHPPRDSSLS
SSPYDSLPPSPTLSDGHPPPSGSSSLSSSSSSISFPLSLSNSFTSGISSGSQGNAEGSPG
HGGPPGATPASLEDLIWLAALQQQFGGGGEVAGPATLLGALGGGAPERGDRERGPVNGFL
GCEDAVEALLNSAAAAVSSQFPGLSQSSSSNLGDSSSDSGADISCPKGTDMCHRPLVFHS
SAAPSLANAAPGAASAPYPQPLSPQGRLHHHQHHHHHPHHPMHGGQHHHHHHHHQQLNQC
GANDRFSDEQLVNLSVRELNRHLRGVSKDEVVRLKQKRRTLKNRGYAQSCRYKRLQHRHA
LESEKHVLTQQLDQLQCELTRVLRERDAYKARYEKLLGANHGIAGDAQPTRTSNPPSSPP
DYFL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
cccatgtcctctctcccccccagccccctcgccatggagtacctgaacgacttcgacctc
ctcaagttcgaggtgaaaccggacacccctccgctccctctgtaccccaaatccggcctc
ccccacgacccctccagctccccgtacaccgagcaccctccgcgggactccagcctgagc
tccagcccgtacgactcgctgccgccctcgccgacgctcagcgacggccacccgccgccc
tcgggctcctcctccctctcgtcgtcgtcctcctccatctccttcccgctgtccctctcc
aacagcttcacctcgggcatcagctcgggctcccagggcaacgcggagggcagcccgggc
cacggggggcctcccggtgccacgccggcctcgctggaggacctgatctggctggcggcg
ctgcagcagcagttcggcggcggcggcgaggtggcggggcccgccacgttgctgggggcc
ttgggaggaggagcgccggagcgaggggacagggagagggggccggtcaacggcttcctg
ggctgcgaggacgccgtggaggcgctgctgaactccgccgccgccgccgtcagctcgcag
tttccaggtctttcccagagttcgagcagcaacctgggcgactccagcagcgacagcggc
gccgacatctcctgccccaaagggacggacatgtgccaccggccgctcgtcttccactca
tccgccgctccctcgctcgccaacgccgcccccggcgccgcctcggccccttacccgcaa
cccctcagcccccaggggcgccttcatcatcaccagcatcaccatcaccacccgcaccac
cccatgcatggcggccaacaccaccatcatcatcatcaccaccagcagctcaatcagtgc
ggggcgaacgaccgcttctccgacgagcagctggtgaacctgtcggtgcgagagctgaac
cgacacctgcgcggtgtgagcaaggacgaggtggtgcgcctgaagcagaagcgccgcacg
ctaaagaaccgcggctacgcgcagtcctgccgctacaagcgcctgcagcaccgccacgcc
ctggagtcggagaaacatgtgctcacgcaacagttggaccagctgcagtgtgagctgacc
cgagtgctgcgggagagagacgcctacaaggctcgctacgagaagctcctcggcgccaac
cacggcatcgccggcgacgcccagccgacccgcaccagcaacccaccttcctcgccccct
gactacttcctctga
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