KEGG   Cyclopterus lumpus (lumpfish): 117730551
Entry
117730551         CDS       T09199                                 
Symbol
gnb1b
Name
(RefSeq) guanine nucleotide binding protein (G protein), beta polypeptide 1b
  KO
K04536  guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04081  Hormone signaling
clum04082  Neuroactive ligand signaling
clum04371  Apelin signaling pathway
clum04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    117730551 (gnb1b)
  09133 Signaling molecules and interaction
   04082 Neuroactive ligand signaling
    117730551 (gnb1b)
   04081 Hormone signaling
    117730551 (gnb1b)
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    117730551 (gnb1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117730551 (gnb1b)
   04031 GTP-binding proteins [BR:clum04031]
    117730551 (gnb1b)
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117730551 (gnb1b)
  Exosomal proteins of colorectal cancer cells
   117730551 (gnb1b)
  Exosomal proteins of melanoma cells
   117730551 (gnb1b)
GTP-binding proteins [BR:clum04031]
 Heterotrimeric G-proteins
  Beta Subunits
   Beta [OT]
    117730551 (gnb1b)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_EIPR1 eIF2A Beta-prop_HPS5 WD40_RFWD3 DUF4407 Myc-LZ CaM_bind
Other DBs
NCBI-GeneID: 117730551
NCBI-ProteinID: XP_034388205
Ensembl: ENSCLMG00005021663
LinkDB
Position
5:complement(16457733..16469722)
AA seq 340 aa
MSELDQLRQEAEQLKNQIRDARKACADATLSQITANIDPVGRIQMRTRRTLRGHLAKIYA
MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
AGHTGDVMSLSLAPDSRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
FATGSDDATCRLFDLRADQELMIYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgagtgaactggaccagttacgccaagaggcagagcagctcaaaaatcagatcagagat
gccaggaaagcatgtgcagatgccacattgtcacagatcacagctaatattgaccccgtt
ggccgaatccagatgcgtacaagaagaacactgcggggtcatttggctaaaatctatgcc
atgcattggggaacagattccaggctcttggtcagtgcctctcaagatggcaaactcatt
atttgggacagctataccacaaataaggtccatgccatcccacttcgatcttcctgggtc
atgacttgtgcatatgcaccttcaggaaattatgtggcctgtggtggcttggacaacatc
tgctcaatttacaacctaaaaacgcgtgaaggaaatgtacgtgtgagccgtgagctcgct
ggacatacaggatacctgtcctgttgtcgctttcttgatgacaaccagattgttacaagc
tctggagacaccacttgtgcactttgggacattgagactggccagcagacaaccacattt
gctggacacacaggtgatgtcatgagcctgtcattggcccctgactcacggttattcgtc
tctggtgcttgtgatgcctctgctaaactctgggatgttcgagagggcatgtgcagacag
acatttactggccatgagtctgacatcaatgccatctgtttcttccctaatggcaatgcc
tttgccacgggctccgatgatgccacctgcaggctttttgatctgcgtgctgatcaggaa
ttaatgatctactctcatgacaatatcatatgtggaatcacctccgttgcattctcaaag
agtggccgtcttcttctggcgggatatgatgacttcaactgtaatgtgtgggacacacta
aaagcggaccgtgctggtgtgttggctggacatgacaaccgcgttagctgcctgggagtt
actgatgatggcatggcagttgcaacaggatcctgggacagttttctgaagatctggaat
tga

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