Cyclopterus lumpus (lumpfish): 117733195
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Entry
117733195 CDS
T09199
Symbol
spen
Name
(RefSeq) msx2-interacting protein isoform X1
KO
K25100
Msx2-interacting protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117733195 (spen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117733195 (spen)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
117733195 (spen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINT_MID
MINT_RID
RRM_1
SPOC
RRM_5
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
117733195
NCBI-ProteinID:
XP_034392532
LinkDB
All DBs
Position
7:complement(6774455..6789363)
Genome browser
AA seq
3215 aa
AA seq
DB search
MNLPVSDSSSSSSDDSPARSVQSAAVQAPSALPLSSLDKDEPRKSFGIKVQNLPVRSTDT
SLKDGLFHEFKKHGKVTSVQIHGASEERYGLVFFRQQEDQEKALGASKGKLFFGMQIEVT
AWNGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKSTAYHDLLNIFQRFGEIVDIDI
KKVNGAPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPTTCVWLDGLASNTT
EQFLTRHFCRYGHVVKVVFDRMKGMALILYNNIEYAQAAVKDTKGWKIGGSKIKVDFANQ
ESQMAFYRSMQASGQDIRDFYDLLSERRDDRRTQYEFQAERQYYENVRTPGTYTEDPRRK
YPARSREFYTEWDPYQADYYDPQYFEDPREYREYRADPYEQDIRKYSYLQRERERERERF
ETDRGRDHGRRTIERSQSPSHVASRRPASPTASPALIPSDSDRRICCRSSERSGSCSSIS
PPRFEKLEKVRTERYNKTDKLENDRVFEVERPNLVEKEKRAGRKDRGDKDKSEKQRLKKL
KVASPIIQACETEPEPEPEPELERDGSPESVLRSKSTKIPKEGLSKGRLDLLPCVVQLTR
VKEKEGKLIGQSVQEKPNPRGGSDSPRLASPLADQRSPPFCSEPSKSDISKHVKVPRDKN
MHSSVEVIDKDAKIKSKKHGKSEMGFESCISVDIDRLAARKRRFEDSGKTDRQKRTSEED
VVKPGLHKLWNNAKETDLDKNLSIKGMHKKEHHKDKCVRMVSVISPKDGRDCEVHSVGFS
LEQQSQLGELPEDSTDQLDSPYLKMDLAGSKSENGSNLTKMLEDGSFDLDGLKEQRPVLS
KNEQGKCRDSNDTDEHNVHIDQNICTKQIEQSNWLRPKLADPDNLVKFENPASIENNDFG
KDYIMHDVSKSIQDMVNEDLSSSKRKKVENLGFEIVTAKRERNFPSSQKLNDDMYQSITP
SIGDGHFCANEQDETAQISVSIINKDRKSPTKDEKCSHTESLTNSLGLTDFQPSDTELPK
LKTTLLGCDEELMHRWERRIKSDSLRMDMTFPSDIAKHETIRKRLGQDLEPGEVQSDSDE
DGENKHISPKSSSSLSFILRERDERMTDLKLSGSLEKNKFYSFALDKTITPDTKALLERA
KTLYSSREDNWSFLPSRFPTSHSCSDKDKVELAPRPIPSWYMKKKKIRTDSVEKLHDKKE
ELKPQDQERQDLFASRFLHSSIFEQDSRRLQHLERKDQALETRVNNKPFAKPGATETQPE
SGVGDMPQEPIVLFHSRFLELQQQKDKDYSPPDSENDSIVVEIKREEGQNSDNMLSDKES
EPVLKVEQKSASPPLIMLVSPFAFAPKEMSSPEKKEFLTPSSDQPVSFVKEEKVEPVFEL
SPSYSFPQEDFKPGAPKLTITPPGVLLGPENEMETKAEFIEPKAKIGDSLALVHNPLVED
KSPTFSASLSGLVRGTAEFTYSDYLKIEEKTEIIKTEPKIENPESKHSEASQKTETDSEA
CMPELEAEIKPLPNRRQPKSKKAKPLSVLRISQPSQIVATEKPATRKSERIDREKLKRAS
SPRAEAPKASVESKATSKSPIHASDSEQNLESSLIHGRTRRRNVRSVYATLHEDDPAGKE
VVEPARSMRKRGADKEPIQQDVPIPHTNARRGRPPKRGIKRGEDASPVKGDQQKMIEEGT
EVKETSTTVELMKASEGWRSPRTQKVQQTQLTSPALVNKKGSRIDKQSGSPSELAEQADP
ASHDESELDPKADSELYVKLSEKVENESSQLHRREKDVKDSGGKKSTDGDIEKLDTTFSE
KRPQPEKNLKMKTPRLKRNTKQVTEDKSHSLKNLEIRVSVDDVKGLLRSGDDELESFEAP
TITQTKTVVKENEETNSIGFLKECEELDTEEQEDNLSEPELPANPAALLARQMELEQAVE
NIAKLSVEQLPRPYKEPPSEPPTILPPVIVEPEAEVEEKRAYPASETELAAAIDSITAEE
TCADTDGFTAPPTFTGRIPTPESSSSSSNEIMDPETHMVINNILAADSDDGPVTPTTKGL
MAETKAAKNASLLETSKKTGRVRAKTLKKSRSRKGAANKKGDTAEEVSQPEPSPVKLPES
IPEDSETNNSKAATVTAGATAAASVVTAVATCRLDVTSAITVNTPKEAEQPEVEQPVPKE
SAFHSGTSNIPSSKKHSRADGPSTPNLPPARPQPVSHFSVPLMRPAKIPLSPDWPPRTEE
SKIYVAPSCHVTVLTPSPPQSITLGTPSINPPMPPDTKASDIDPSSSTLRKILMEPKYVS
APNSNSIPTTMVTSALSDPSRMSENENPSDIVGSRQLHPEERPPLPPLPIHHKPFPLTES
QQNCGEKIQHTVISPATSVISRIPMPYDTEETPRISLSNRSTGLSIPKQKFRSNSNENNR
YHGMDIIEDATRGRSVVETTPYSTGTSHGLRVNTSEGVVVLSYSGQKTEGPHRMRAKISQ
IPQASAGDIEFQQSVSKSSIKQDPLITSSQSATPKITPTPTAYGHTGVLLTSQSYNSQPV
ISSMKQEVIGCDKSEAPYHIASQGGVVKMYQQPVSSPQVLMYNQAVIQQQHGKRGLGSEP
LPKKMDIGKAVQQSNLSPVMSPHHPSLSGTRMSPSPSIPTDRSALHLKQEPHSPRTAVHS
PSHFVKACPPSSSPRGTSVVLGHGIPPISTYHSGMHHPHSEQSSVIIQPHSVTQAMAHEA
RMNTPPMSGINYGRRGDSLSSSHPGPPQRSNTPQPNVIRDLVLQSHSSPQGSVSGSGGSS
VSEEDPRHFNQALSRTSVPQLQSDVMMIHSDHRGLHPSIRMDQYRDMHQRILMHQQLGEP
VAVETRQSRTSETGTSSSNISGPSKSPIVGKTIDLSAKESLKPLEGKLIHPPSNESRIRG
VHASSPVLVSPHPLGVQLMHPGGAASFPVYRDMRGFPSQFPGHPSSGHNLANQGITSSQV
PPEPELGHRGKMSQSHVGGSGSKPESSHLRHPTSTELSHISRISRDTVSPSYQSPMSSPM
SLTHKPDLSLQKGHTAFLPTPMPALPPSSSLHSRPNAKLEHSGHRSVDMVQLLTKYPIVW
QGLLALKNDQAAVQLHFVSGNTILAQRSLPPTEGGPLLRIVQRMRLEASQLDSVARRMTV
ENDYCLLLALPCGRDQEDVLGQTQALKTGFITYLQAKQAAGIINVPNPGSNQPAYVVQIF
PPCEFSESHLSRLAPDLLNSISSISPHLMIVIASV
NT seq
9648 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgccagtgagtgattctagcagtagttcaagtgatgactccccggcacgttca
gtgcaatctgctgctgttcaagcaccctcagcacttcctttatcctcccttgacaaggat
gaaccacgcaaaagctttggcatcaaagtccaaaatcttcctgttcgctccacagatacg
agcctgaaggatggtttgttccatgaatttaagaaacatggaaaagtcacatctgtacaa
atccacggagcttcggaggagcgctatgggcttgtctttttccgccagcaagaggaccaa
gaaaaagcccttggagcatcaaaggggaagcttttttttggcatgcaaattgaggtcaca
gcctggaatggccccgagactgaaagtgagaacgagtttcggcccttggatgagaggata
gacgaatttcatccaaaggccacgcgaacattatttattggaaacctggagaagtccacc
gcttaccatgacctgcttaacatctttcaacgctttggagaaatagtggacattgacatt
aagaaggtgaatggagccccacagtatgcgtttctacaatactgcgacattgccagtgtc
tgcaaggctataaagaagatggatggagagtaccttggtaacaatagattaaagctgggc
tttggaaagagtatgcctacaacgtgcgtttggttggatggattggcttcaaacacaact
gagcagtttcttactcgtcatttttgccgctatggacatgttgtcaaggttgtatttgac
cgaatgaaaggaatggcccttatcctgtataacaacattgaatatgcacaagccgctgtc
aaagacacaaaaggttggaagatagggggcagtaaaatcaaggtggactttgccaatcag
gaaagtcagatggcgttttatcgttcaatgcaggcatctgggcaggacattcgagacttt
tatgacctgctctctgaaagaagggatgatcgacgaactcaatatgagtttcaagccgaa
agacagtattacgaaaatgtacggacaccaggaacatatacggaagatccacgtcgcaaa
taccctgccagaagtcgggagttctacacagaatgggacccatatcaggcagattactat
gatccacaatactttgaagacccccgtgaatatcgtgaatacagagctgacccttatgag
caggacattcgcaaatacagctatttgcaacgggaacgtgaaagagagagggagcgcttt
gaaacggatcgtgggcgtgatcatggacggaggaccattgagcgtagtcaaagcccatct
cacgttgcctctcgtcgtcctgccagcccgactgcatctcctgcgttgataccaagtgat
tcagatcgtcgtatttgttgccgatcttctgaaagaagtggtagctgcagttcaatctcc
ccaccgaggtttgaaaaacttgaaaaggtacgcaccgaaaggtacaataaaactgacaaa
cttgagaacgatcgagtctttgaagtcgaaagaccgaatttggttgaaaaggagaagcgg
gctggacgtaaagatcgaggggacaaagacaaaagtgaaaagcagaggcttaagaagcta
aaagttgcatcacccattatccaagcatgtgagacggaacctgaacctgaacctgaacct
gaacttgaacgagatggtagccctgagtcagtccttcgaagtaaaagcactaaaattcca
aaggaaggcttgagcaaaggaaggttagatcttctgccgtgtgttgtgcaattaacacgc
gtgaaagaaaaagaaggaaaattgattggtcaatctgtccaagaaaaaccaaacccgagg
ggtgggagtgacagtcccagattggcatcacctttagctgatcagaggagtcccccattc
tgctcagaaccatcaaaaagtgatatttctaagcatgttaaggtgcccagagacaaaaat
atgcacagttcagtggaggttattgacaaggatgctaaaatcaaatccaaaaaacatggg
aaatctgaaatgggatttgagagttgtatttctgtagatattgaccgtttggcagcaagg
aaaaggcgttttgaagactctgggaaaactgatagacagaagagaactagcgaggaggat
gttgttaaacctggacttcacaaactatggaacaatgctaaagagacagacttggataag
aatctttcgataaaagggatgcataaaaaggagcaccacaaggataaatgtgtccggatg
gtttcagttatcagtcctaaagatggacgagactgtgaagtccactctgtaggcttttct
ctggagcagcagtcacagctaggggagctgcctgaagactctacggatcagttggactct
ccctacctaaaaatggatttagcaggatcaaagagtgaaaacggctccaatctcacaaag
atgttagaagatggcagctttgatttggatggattaaaagaacagagaccggttttgtct
aaaaatgaacaggggaaatgcagggactcaaatgacacggatgaacacaatgtgcacatt
gatcagaacatttgcacaaaacaaattgaacagagtaactggctacgacccaagcttgcc
gatcctgataatttagtcaagtttgaaaacccagcaagtattgagaataatgactttgga
aaggattatatcatgcatgatgtttcaaaatcaattcaggacatggtcaatgaggacttg
tcgtccagtaaaagaaagaaagttgagaatttgggctttgaaatagtcactgcaaaaaga
gagcgcaactttccaagttcccaaaagttgaatgatgacatgtatcagagtataacaccc
tcaataggagatggtcacttttgtgcaaatgagcaagatgaaaccgctcagatttctgta
tcgattataaacaaagacagaaaatctccaacaaaagacgagaaatgttcacacacagag
tcattgacaaacagtttgggactgacagattttcagccttctgacactgagctcccaaag
cttaagacaaccttgctgggctgtgatgaggagttgatgcaccgatgggaaagaaggata
aagtctgattcacttagaatggatatgactttccccagtgatattgcaaaacatgaaacc
atccgcaaacgccttggccaagatttagaacctggagaagtgcagtctgattcagatgag
gatggagaaaacaaacacatctctcccaagtccagtagttccttatcttttatccttcgg
gaacgtgacgagaggatgacagacctaaagctttcaggctcattggaaaagaacaagttt
tattcttttgcattagataaaactataactcctgataccaaagcactccttgaaagagcg
aagacactgtattcctccagggaagataattggtcctttctcccctcacgttttccgacc
tcccacagctgttcagataaggacaaggtagagctagcacctcggcctattccttcttgg
tatatgaaaaaaaaaaagattcgtactgactctgttgaaaagctgcatgataaaaaggag
gaacttaagccacaggaccaagaacgacaagacctgtttgcttctcgcttcctgcacagc
tcaatctttgaacaggattcccgccgtttgcaacatcttgaacgtaaagaccaagcttta
gaaactcgagttaataataagccttttgctaagccaggtgctactgagacacagcctgaa
tctggagtaggtgacatgccacaagagcccatagtgcttttccatagtcgttttttggag
cttcaacaacaaaaggacaaagactattctccacctgattctgagaatgattcgatagtg
gtagagattaaaagagaagaagggcagaatagtgataacatgctgtctgataaagaatct
gagccagtactgaaggttgaacagaaatcagctagccccccattaatcatgttagtttcc
ccatttgcttttgccccgaaagaaatgtcttcaccagaaaagaaagaatttttaactcca
tcctcggatcaacctgtgtcatttgtcaaagaagaaaaagtagagccagtttttgagcta
tcgccatcatattcttttcctcaggaagacttcaaaccaggtgctcctaagctaaccata
acccctccaggtgtcctgttggggccagaaaatgaaatggaaacaaaagctgagtttatt
gaacccaaagcaaaaattggagatagtttggcgttggtacataatcctcttgtagaagat
aagtctcccacttttagtgcttccctaagtggtttagtgagagggactgcagaattcact
tactctgactatctaaagattgaagaaaaaactgaaattattaagactgagcctaaaata
gaaaatccggaatcaaaacactctgaggcatctcagaaaactgagacagatagtgaggca
tgtatgccagagctagaagctgaaataaaaccattaccaaatcgcagacaacccaagagt
aaaaaggcaaaaccattgtcagtattacgtatttcccaaccttcccaaattgttgccact
gaaaaacctgcaacacgaaagagtgaacggattgacagagagaaactcaaaagagcctca
tctcctcgggcagaagcaccaaaagctagtgttgagtccaaagccacatccaagtcacca
atacatgcatcagattcagagcaaaaccttgagtctagtttgatccatggcagaacacgt
cgcaggaatgtaagatcagtctatgccacactccatgaagacgacccagctggtaaagag
gtggttgagccagcacgctccatgcgcaaacgtggtgcagataaagaaccaatacagcaa
gatgttccaattccacataccaatgcaaggcgaggacggccacctaaaagaggcatcaaa
cgaggtgaagatgcatcgccagttaagggggatcagcagaaaatgattgaagaaggcaca
gaggtcaaagagacctccactactgtagagcttatgaaagcctctgagggatggcgttca
ccccgcacccaaaaagtacaacaaacacaactgacatctcctgctctagttaacaagaaa
ggaagtagaatagacaaacagtctgggagcccttcagagctagctgaacaagcagatccg
gcaagtcatgatgagtcagaacttgatcctaaagctgattctgaactgtatgtgaagcta
tcagaaaaggtggaaaacgaaagctcacaattgcacaggagggaaaaagacgtgaaagat
tctggtggaaagaaatctactgatggggatattgaaaagttagacaccaccttctctgag
aagagaccacagcctgaaaagaatttaaaaatgaaaacaccaaggctgaaaagaaatacc
aagcaagtcactgaagataaatcacacagcttaaaaaatcttgagatccgtgttagtgtt
gatgatgtaaaaggtttactacgttcaggggatgatgagcttgagtcatttgaagctccc
accattacacaaaccaaaacagtagtaaaagagaacgaggaaacaaatagtataggcttt
ctaaaagaatgcgaagaacttgacacagaggaacaggaagacaacctatcagagcctgaa
cttcctgctaatccggcagctctcttagcacgacagatggaactagagcaggcagttgaa
aatattgccaaactttcagttgagcaacttcctcgaccatataaagaaccaccttcagag
ccacctaccatattgcctcctgtcatcgtggagccagaagctgaggttgaggagaagcga
gcttatcctgcaagcgaaactgaacttgcagccgctatcgattccattacagctgaagaa
acatgtgcagatacagatggtttcacagctcctcctactttcactggtcgtatccctacc
cctgaatcatcatcttcctcttccaatgaaattatggatcctgaaacgcacatggtgatc
aacaatattcttgctgcagactcagatgatggtcctgtgacaccgaccacaaaggggcta
atggcggagactaaggcagctaaaaatgcctctctacttgagacatccaagaaaaccggc
agagttagagccaaaactctgaagaagtcgagaagtcgcaaaggtgcagctaataagaaa
ggggatactgctgaagaggtttcacaaccagagccttccccagtcaagttaccagagtcg
atcccagaagattcagaaaccaataattcaaaagcagccactgttacagctggggctact
gcagcagcttctgtggtcactgccgttgcaacttgtagacttgatgttacaagtgctata
acggtaaacacgcccaaagaggcagaacagcctgaagttgaacagcctgtacccaaagaa
tctgcctttcattcaggcacaagcaacatcccaagtagtaaaaagcattcccgagcagat
gggccatctacccctaatcttccacctgcccggccacaacctgtatctcacttcagtgta
cccctgatgcggcctgccaaaattccactttcgccagactggcctcctagaactgaagaa
agtaaaatctatgttgctccttcctgtcatgttacagtgttaactccttctccaccacag
tcaattacacttggaacgccttcaataaatcccccaatgccacctgacacaaaagcctca
gatattgaccctagttctagtaccttaagaaaaatcctaatggaacctaaatatgtttct
gcaccaaacagcaattctatacctaccactatggtaacgtctgcactgtcagatccttca
cggatgtcagagaatgaaaatccctctgatatagtgggttcaagacagttacaccctgaa
gagagaccacctttaccacccctgcccatacaccacaaaccctttccactgacagagtct
caacagaactgcggagagaagatccagcatacagttatttctcctgctacctcagtaata
agtcgaattccaatgccttatgatacagaggaaactccacgaatttctctaagcaatcgc
agcactggcctgtctattcccaagcaaaaatttagatcaaactctaatgagaataatcgc
taccatggcatggatattatagaagatgcgacgagagggcgctctgttgttgagaccact
ccctacagtacaggcaccagtcatggccttagggtcaatacatcagagggtgttgttgtt
ttgagttattctggtcagaaaaccgaaggacctcataggatgagagccaaaattagtcaa
attcctcaagcgagtgctggtgatatagaatttcagcaatctgtgtccaaatcttcaata
aaacaagacccactcatcacatcatcccagtctgctacccccaaaataaccccaactccc
acagcttatgggcacacaggggttctcttgacaagtcagtcttataactctcaacctgtc
atatccagtatgaagcaggaggttattggctgtgacaaatctgaagccccgtatcacata
gcgtcccaaggtggcgttgtaaagatgtaccaacagccagttagttctcctcaagtcttg
atgtacaaccaagctgtgatacagcagcagcatggcaagagaggactggggtctgaacct
ctacccaaaaagatggacattggtaaagcagttcagcagtctaatcttagcccagtcatg
agtccacaccacccatcactgtctggaacccgcatgagccccagccctagcataccaact
gatcgttcagctctacacctaaagcaagaaccacattccccacgaacagccgttcactcc
ccttcacactttgtcaaagcctgtcccccaagcagttctcctcgaggcacttcggtcgtt
ctaggtcacggcataccaccaatttctacatatcattctggtatgcatcacccgcactcg
gagcaatcctctgtcataattcaacctcacagtgtcactcaggcaatggctcatgaagcc
agaatgaacaccccaccaatgtctgggataaactatggaaggcgaggtgactccctgtct
tcttcccacccagggcctccacagcgctcaaacacgcctcagcctaatgtcattcgagat
ttggtactgcagtcccattcaagtccgcagggttccgtatcaggtagcggtggcagcagt
gtaagtgaagaagaccccagacactttaaccaagccctgagtagaacttctgtaccccag
ctccaatcagatgtaatgatgattcacagtgatcacagagggctccacccaagcatacgc
atggaccagtacagagacatgcaccagcgcatcctcatgcaccagcaactgggagaaccg
gtcgctgtagagacaagacagtcacgcacctcggagactggaacgtcttcaagcaacatc
tctgggccttcaaagagtcctatcgtgggaaagaccattgacctttcagcaaaagaatct
ctcaaaccactagaaggaaagctgatacatccaccctccaacgaaagtagaatcagggga
gtccatgcatcttctcccgtcctggtgtctcctcacccacttggcgttcagctgatgcat
ccagggggtgcggcctcctttcctgtatatcgggacatgcggggctttccatcccagttt
ccagggcatccttcatcgggacacaacctggctaaccaaggcataacatcttcacaggtc
cctccggagcctgaactgggtcatagaggtaaaatgtctcagtcacatgtgggaggaagt
ggttccaaacctgagagttcccatctccgtcatcctacctctacggaactctcgcacatt
tccagaatatcacgggatacagtctccccctcgtaccagtctcccatgtcgtcccctatg
agtcttactcataagccagatctatctctacagaaaggccatacagccttcttgccaaca
cctatgccagcattacccccatcaagttctctgcactcacgacccaatgctaaattggaa
cattcgggacatcgttccgttgacatggttcagcttttgacgaaatatcctattgtatgg
caaggcctgttggcactgaagaacgaccaggctgccgtgcagttgcactttgtttctggc
aataccatactggcccagcgctccttgccacccacagagggaggtccgctcctacgtatt
gtccagaggatgaggcttgaggcttcccagttggacagtgtggcacgcagaatgactgtg
gagaatgactactgtttgctactggctctaccctgtggtcgagaccaagaagatgtcctt
ggtcaaacccaggccttgaaaactggcttcatcacctacctgcaagccaaacaggcagcc
ggcattatcaatgtgcccaaccctggctctaatcagccagcttatgtggtgcagattttc
ccgccgtgtgaattctcggagagccacctctcgcgcctagccccggaccttctcaacagc
atctccagcatttcccctcacctcatgattgtcattgcctctgtttaa
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integrated database retrieval system
