Cyclopterus lumpus (lumpfish): 117733265
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Entry
117733265 CDS
T09199
Symbol
itchb
Name
(RefSeq) itchy E3 ubiquitin protein ligase b
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
clum04144
Endocytosis
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117733265 (itchb)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117733265 (itchb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117733265 (itchb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117733265 (itchb)
04121 Ubiquitin system [BR:
clum04121
]
117733265 (itchb)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117733265 (itchb)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117733265 (itchb)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
HECT type E3
117733265 (itchb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117733265
NCBI-ProteinID:
XP_034392668
Ensembl:
ENSCLMG00005020232
LinkDB
All DBs
Position
7:complement(5098459..5118663)
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AA seq
917 aa
AA seq
DB search
MASGVTKTGTSNGYPMKAQLQIIVLSAKLKENRKNWFGPSPYVEVTVDGQSKKTEKCKQH
PQPQWKQPITVIVTPFSKLVFRVWSHQTLKSDVLLGMATLDVSDTLKSNDMKISEVVQTL
QLCADRDQSDVVGDLSVCLDGLTVDSEAFATAEADHHNTSNGNSQTNGDHAVSRSRDSSP
VVDGVEHRSSPSGRRSVSSSGSPSVSSRPLRPPRPSRPPPPTPRRPASSPASSSNGSAPA
DGSDGQSGSDTPVRTPASEHSAAPESSPSAGSDRNSLPASGSAAAATRQPTSSAPPAVTP
AVPPAVTPAVLPAITPAVLPAITPAGTPSVTPGVPAVNAGPLPPGWEQRVDQNGRLYFVD
HVEKRTSWERPEPLPPGWERRVDQMGRVYFVDHMTRTTTWQRPTMETVRNYEQWQHQRSQ
LQGAMQQFNQRFIFGQQDPVSATQNKEFDPLGPLPHGWEKRTDSTGRVYFVHHPTRATQW
EDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRATTYIDPRTGKSSLENGPQITYVR
DFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDSFQQIMSFNAQDLRRRLWIIFPGEEG
LDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFKFIGRFIA
MALFHSKFIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLMWIKDNNIEECGLEMFFS
VDKEILGEISTHELKTGGGDLQVTEENKEEYIRLVAEWRMSRGVEEQTQAFFEGFNEVLP
QQYLQYFDAKELEVMLCGMQEIDLADWQRSTIYRHYARSSKQIIWFWQFIKEMDNEKRMR
LLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQM
KEKLMFAIEETEGFGQE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggagtcaccaagacaggcacttccaacggttacccgatgaaggcacagcta
caaatcattgtgctgtcggcgaaactcaaagagaacaggaagaactggttcggccccagt
ccctatgtggaagtgacggtcgacggccagtccaagaagacagagaagtgcaaacaacac
ccacagccccaatggaagcagccgatcactgtgattgtgactccgttcagcaaactcgtg
tttcgtgtgtggagccaccagaccctgaagtccgacgtgttgctgggcatggccacgctg
gacgtcagtgacacgctcaagtccaacgacatgaaaatctccgaggtggtgcagaccctg
cagctgtgtgcagaccgagaccagtcggatgtggtgggggacctgtccgtctgcctggac
ggcttgaccgtcgactccgaggcgttcgccacggccgaggctgaccaccacaatacatca
aatgggaattcccaaaccaacggggatcatgccgtaagccggagtcgagacagctcccca
gtggtggatggcgtggagcacaggtcgtctcccagtggccggaggtcagtgagcagctcg
gggtctccctcggtgtcatcaaggcctctccgacctcccaggccctccagacctccaccc
ccaaccccgcgcagacccgcctcttctccagcgtcttccagcaacggctctgcaccagcc
gacggcagcgatggccagtcgggctctgacacgccggttcgaacaccggcctcagaacac
tcggcagccccagaatcgagtccatcggcaggatccgacaggaactctttgccggcctcc
ggctctgcagccgcagcaaccagacagccgaccagcagcgccccccctgctgtcacccct
gctgtcccccctgctgtcacccctgctgtcctccctgccatcacccctgctgtcctccct
gccatcacccctgccggcaccccttctgtcaccccaggggtccccgctgtcaacgccggg
ccgttgccccccggatgggagcagagggtggatcaaaacggccggctgtatttcgtcgac
catgtggaaaagagaacatcgtgggagcgccctgaaccgctgccccctggctgggagcgc
cgcgtggaccagatggggcgtgtctactttgtcgatcacatgacgcgaaccacaacgtgg
cagcgccccacgatggagacggtgcgtaactacgagcagtggcagcaccagcgcagccag
ctgcagggagccatgcagcagttcaaccagaggttcatattcgggcaacaagacccggtg
tcagccactcagaataaggagtttgatcccctcgggcctctgccacatggatgggagaag
aggactgactcgactggtagagtttattttgtacatcaccctacgcgagcaacacagtgg
gaggacccacgaacacagggtttgcttaatgacaagcccctcccagagggctgggagatg
aggttcaccgtggacggtattccctactttgtagaccacaacaggagagcgaccacctac
atcgaccctcgcactggaaaatcctcacttgaaaacggacctcagatcacctacgttcga
gacttcaaagccaaagtacagtacttcagattctggtgccagcaactgtcgatgcctcaa
cacatcaagatcacggtaaccagaaaaaccctgtttgaggactccttccagcagataatg
agtttcaatgctcaagatctgcgtaggaggctatggatcatcttcccgggagaagaaggc
ctcgactacggaggcgttgccagggagtggttcttcctactgtctcatgaggttttgaac
cccatgtactgcctgttcgaatatgccgggaaagataactactgtctccagatcaaccct
gcctcctacatcaaccctgaccacctcaaatatttcaagttcataggacgcttcattgcc
atggctcttttccacagcaagttcatcgacactggtttctcactgccattttacaagcgc
atcctgaacaagccattggccctcaaagacctggagtcaatagacccggagttctacaac
tccctcatgtggatcaaggacaacaacatcgaggagtgcgggctggagatgttcttctct
gttgacaaagagatcttgggggaaatctccacccatgagctgaaaacaggaggaggagac
ctccaggtcacggaggagaacaaggaggagtacatcaggctggtagcagagtggaggatg
tccagaggagtggaagagcagacgcaggctttctttgaaggcttcaacgaagtcctccct
cagcagtacctgcagtactttgatgctaaagagctcgaggtgatgctgtgtggtatgcag
gagatcgaccttgcagactggcaaagaagcaccatctacagacattacgctcggagcagc
aaacagatcatctggttctggcagtttataaaggagatggacaatgagaagaggatgagg
ctgctgcagtttgtcaccgggacctgtcgcctgcctgtcggaggctttgccgaccttatg
ggaagcaacggtccccagaagttctgtattgagaaggtgggaaaagaaaactggctcccc
aggagtcacacgtgcttcaacaggctggacttgccgccctacaagagctacgagcaaatg
aaggagaagctgatgtttgccatcgaggagacggaaggcttcggacaggagtga
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