Cyclopterus lumpus (lumpfish): 117733434
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Entry
117733434 CDS
T09199
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117733434
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117733434
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
Arm_2
Atx10homo_assoc
V-ATPase_H_N
DUF4144
Motif
Other DBs
NCBI-GeneID:
117733434
NCBI-ProteinID:
XP_034392965
Ensembl:
ENSCLMG00005013675
LinkDB
All DBs
Position
7:complement(14111152..14127605)
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AA seq
711 aa
AA seq
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MTALDPLRSAMTIRGPDDTSLAVPSDSKLSTGPQRVLEQVHTIKRSKSKPGKNGSLSPSE
ISLPQKFEFGAFRFSPSKANGTSSRINSSLSTTYNKAVNTQRSRTLSAKTMAGRQFTASG
TWDQQTNGSNWLQSANGLKSARSDPALAPSFSAAPVMRAKGQVVQSQSNIQSRANRHSTY
SMANSTQLTNSQTRIVQPPSAQIHTEGRMGTIKASKIEQPSAVENMSEMTLKQAVEFLTH
HEENYQQCGANFIHHTTFKEEGTKQEVFQLGGIPALVALLRSPNPGVNQATAGALRNLVF
KDQDNKLEVQHCGGIAKSLQLLKETDSTETQKQITGLLWNLSSSDALKKELIATALPALT
ENVVVPFTCWSDNCAKNNIHPDVFYSATGCLRNLSCSQEKERRAMRECHGLIDSLMSYIQ
SCVAEENPDDKSVENCACILHNLSYQLEEESPECFAKYQPQTENQPGGRKSPTIGCFSPK
SSKAKQEFSFDAVRGKPEDAAPSGVKWLCHPKAMQTYLSLMASSKKGATMEACCGALQNL
TANKGIGSSAMSEIMVQKLGTLLHILPLLKSPNQSLQKTAMSLLGNMSRTSSLQTTMAKQ
ILPELTSLLSAGPREMGNSDETIVTACNTVRSLMLADTVVSKRFIDKELVSSVAELSENN
SFPKASKAASRLLYSLWNEKNFQGAVKKLGMVKSVFVNDNTTAVHKSMQIE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgacggctttggatccgctgcgttccgcgatgaccatcaggggtccggacgacacgtcg
ctcgcggtgccctccgacagcaagctgagcacgggaccgcagcgcgtgctggaacaagtg
cacaccatcaagaggagcaagagcaaacctgggaagaacggctctctgtcgccctcagaa
ataagcctgcctcaaaaatttgagtttggagccttcaggttttctccatccaaagcaaat
ggcacctccagccgcatcaactccagtctgtcaaccacttacaacaaagcggtaaatact
cagaggagtcgcaccctgtctgctaaaaccatggcaggaagacagttcaccgcctcaggc
acctgggaccagcaaaccaacggctccaactggctccagagtgccaatgggttgaaatcc
gctcgcagtgaccctgctttggctccttcattttctgctgcacccgttatgagagcgaaa
gggcaggtggtccagagccagagcaacatccagagtcgagcaaatagacacagcacctac
tctatggccaacagcactcagttgaccaacagccagacacgcatcgtccagccgccctct
gcccagattcacactgagggcaggatgggcaccatcaaagcatccaagatagagcagccg
tctgctgttgagaacatgtcagaaatgacactaaagcaggcggtagagttcctgactcac
catgaagagaattaccagcagtgtggagccaacttcatccaccacaccaccttcaaagag
gagggcaccaaacaggaggttttccaactaggaggtatccccgctcttgtggccctgctg
cggagcccaaaccccggcgtgaaccaggccactgctggagctctaaggaacctggtgttc
aaagaccaggacaacaagctggaggtccagcactgtggcggcatagctaagtccctgcag
ctactaaaggagaccgattctactgagacccagaaacaaatcactggcctgctgtggaac
ctgtcctcctctgatgcgttgaagaaggaactcatagccacagctttgcctgccctgact
gagaatgtggtggtgccatttacctgctggtctgacaactgtgccaagaacaacatacat
cctgatgtcttctacagcgccacagggtgcctgaggaacctgagctgctcccaagagaag
gagcggagggcaatgagagagtgccatggcctcattgactccctcatgagttacatccag
tcctgtgtggcggaggaaaaccccgatgacaagtctgttgagaactgtgcatgcatcctc
cataacttgagctaccaactggaggaagagtcccctgaatgcttcgcaaagtaccaacct
cagacagagaaccaacctgggggtagaaaaagccccacaatcggatgcttcagccccaag
agcagcaaggctaaacaagagttttcatttgacgcggtccggggaaagccggaggacgcc
gccccatcaggtgtgaagtggttgtgccatcccaaagctatgcagacctacctgtctctg
atggcctcgtccaagaaaggtgccaccatggaagcctgctgtggtgccctgcagaacctc
actgccaacaagggaattgggtccagtgccatgagtgagattatggttcaaaagctgggg
actctgctgcacatactccctcttttaaagtctcctaaccagagcctgcagaagacggcc
atgtccctgctgggtaacatgtctcggacgagcagtttgcagaccaccatggcaaagcag
atcctgcctgagctcaccagcctcctctccgccggcccccgagagatgggaaactcggac
gaaactatagtgacagcttgcaacacagtcaggagtttaatgttggcggacaccgtggtc
agcaagaggttcatcgataaggaactggtgtcatcagtggctgaactcagcgagaacaac
tcttttcccaaagccagcaaagcagcttcccggcttctctacagcttatggaacgagaag
aattttcaaggcgctgtgaaaaagctgggaatggtaaaatcagtttttgtcaacgacaac
accacagcagtgcacaagtcgatgcaaattgagtga
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