Cyclopterus lumpus (lumpfish): 117733441
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Entry
117733441 CDS
T09199
Symbol
cxcl12b
Name
(RefSeq) chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
clum04672
Intestinal immune network for IgA production
clum04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117733441 (cxcl12b)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117733441 (cxcl12b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117733441 (cxcl12b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117733441 (cxcl12b)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117733441 (cxcl12b)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Chemokines
117733441 (cxcl12b)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Chemokines
117733441 (cxcl12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
117733441
NCBI-ProteinID:
XP_034392982
Ensembl:
ENSCLMG00005001004
UniProt:
A0A8C2WC20
LinkDB
All DBs
Position
1:9509218..9520615
Genome browser
AA seq
102 aa
AA seq
DB search
MDVKLLALMALMAVATHVPTSNAKPISLVERCWCRSTLNTVPQRSIKELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQQYLKNAINKVKKSRRRKNKIN
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaagctgctggcactgatggctctgatggccgtggccacacatgtaccaacc
tccaacgcaaagcccatcagtctggtggagcgctgctggtgtcgttccaccctcaacacg
gttcctcagcggtccatcaaagagctcaagttcctccacacacccaactgccccttccaa
gtcattgccaaactgaagaacaacagggaggtttgcatcaacccggagaccaagtggctg
cagcagtacttaaagaacgccattaacaaggtgaagaaatctagaagacgcaaaaacaag
ataaactaa
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