Cyclopterus lumpus (lumpfish): 117733924
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Entry
117733924 CDS
T09199
Symbol
nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117733924 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117733924 (nup210)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117733924 (nup210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_9th
Ig_NUP210_1st
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_7th
Ig_NUP210_6th
Ig_NUP210_4th
Big_2
NUP210_Ig
Motif
Other DBs
NCBI-GeneID:
117733924
NCBI-ProteinID:
XP_034393759
Ensembl:
ENSCLMG00005018309
LinkDB
All DBs
Position
7:complement(21802471..21826875)
Genome browser
AA seq
1882 aa
AA seq
DB search
MISPKLCASALLLFITAVGQVNGSPKLNIPKVLLPLTKNTRINYTLEATEGCYRWSSTRP
EVARIQAVDEEGGRSCSRRAVLQALSTHPSRLTSIILAEDVVTGHVLRCDAIVDIISDIQ
IVSTTRELHLEDSPLALKIHALDSEGNTFSTLAGLVFDWTLVKDVDVTGFSDSYKSLRVL
KFSESTYKPPGYISEMERVGKQGDIILVSGQKTGHAKLKAKIEESLYKDVGAAEVRLLIL
ENILLSPAYDVYLLAGTSIRYKVLKIRQGTMTELSMPCDQYELHVQNSAVGTNGNPDAAV
ARLDQSISTITAVQLGHINVVLDHKSLRMQGVSRLPNSTLHVVEPGYLGFKIHPGDSWVL
ETGRVYDVLIEVFDKSGNKIYLSDNVRIDTGFPSEYLELLQSSLNGSYHRVKALREGLTL
IDATLKAVVDETGRIHELANPVHNEQDVEIYNPIVLSPSILTFPWQPKVGAYQYTIQATG
GSGNFSWSSSNTAVATVTVKGVMTTAHDVGVGVVYAHDLRNSLHFGQMKVYVVEPVAMDF
APCPVEARVGLVLDLPLRIFGLLEEVENERVMLSDCSHFDLQVEEENHGVFQLLDGRLAP
GQEHCSGVRAKALAPGYTILTVSYTHGNVHLSVKITIAAYLPLRAIDPVSVAVVTLGSSK
DMLFEGGPRPWVLEPSKFFCNLSAEDEASVSLALTGPSSHNYNQHWVRATCRALGEQVLE
VMLGNKASVTNPYPAVELAVVKFVCARPSRLTLVPVYSNPQLDLSCPLLQQNKQVVPVSN
YRNPILDLAAFDQQGRKFDNFSSLSVLWESTVVSLASIEPALPMELQLVEDDNKQMKLHG
RQTVLVHHQTGIAAIAVTALGYQVSHLAAAKVPRPYGTLTPVSATLELLLVEDVKVSPAI
VTIYNHPDVRANLALREGSGHFFVNTSVRGVANVVFQEAQGTAQVAPVHPGEVTVMVHDI
CLAFPAPAKATVHVSDILEVYVRVVDKVEIGKSVKAYVRVLDDNKKPFPASSFRFMNLKL
KAASAIVSLKHLVEPTEIDSAVFVVKGASISQTTLSAVVVDKNGRKIASAPQPIEVFPPF
KLIPRKITLLIGAMMQITSEGGPQPQSNILFSISNEEVASVNGIGHVRGATVGNVTVTGL
VQAVDAETGKLVVVSQDQVEVEVVRLTGIRIRAPITRMKTKTQMPVYVMGLTNSQTPFSF
GNAVPGLTFTWSTTKRDILDVQPRHSEANVELQSEHNFGMTVTGRTRGRTGLKVVLRVTD
PRAGQLVGSLLELMDEIQIQVYDKLHMVNPEVEAGELLMAPNSALKLQTSRDGVGALSYR
MLDFPDQAVIAEVDDKGFLFSGSLTGISSLLITSQETFGFNQTLILALKVVPVSYVRFST
SPVLYTHTRESLKALPLGIVLTFTVHFHAGTGEALHSANSHLTFSTNRDDLLQVGVGPGN
HTLTVRTINVGLTLLAVWDGDNVGVADYVPLPVGHAIHPDEAHRLVVGDVVCFSAQLTSP
EGGHGTWSSSANGVLQVDPKSGAAVARDSGTVSVYYEIPGVLKTYREVVVEATTWTAATA
QAAPVRIGKETKVLLTTRGTGTNLIGTCSSAQTEAISQLQPETSVSCHLSFTSDEIDFPA
NDVFKTHTSFDSGVGSYACSITLQPMADQRTRALSMSRSNLLVRGGLEGGAFSGEQVGAS
LPIEPGLYSDQTELLLSNLHPSAELTVYGPAAALSNMEVTSASPNIAVQEKEVHQGFPSF
SKYTISAVDPHAAVSTSVSIGSASCSQSIAISVTLIQVADPSAARLDVHTEGGHSLHSFI
NCYQMMFFTLFALLAATAIIIIVLHTVFSPRDQAFQPAFLQRTSPLMPGLGSPGMNSFNH
TIPRTPPGSSPRSRLYSPDYKS
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgatttccccgaagctctgcgcgtcggctttgctgttatttataaccgccgtcggtcaa
gttaacggctccccgaaactaaacatccccaaagtgttgctgccgctcaccaagaatacg
agaattaactacacgttggaagctacggaaggttgctacagatggtcttccaccagaccg
gaagtagctcgcatccaggctgttgatgaagagggcggcagaagctgctcccggagagct
gttctccaggctctctccacccatccctccagactgaccagcatcatcctggccgaagat
gttgttacaggacatgtactgcggtgtgatgccattgtcgacatcatcagtgatatccag
atcgtgtcgaccaccagagagctacatcttgaagactcaccactggcactcaaaattcat
gcactggactctgaaggaaacaccttcagcactctcgctggtctggtgttcgactggacc
ttagtgaaggatgtcgatgtgactggattctctgactcttataaatcattacgggtactt
aaattctcagagtccacctacaaaccccctggatacatatctgaaatggagcgtgtcggg
aagcaaggtgatattatcttggtatcgggacagaaaacgggacatgctaaattgaaggcc
aaaatagaagagtcgttgtataaggatgtgggtgctgcagaagtcagactcttgatttta
gagaacatcctgctgagtcctgcgtacgacgtctacttgctggcgggaacttccatccga
tacaaagtcctgaagatacgacagggcaccatgacagagctctcgatgccttgtgatcag
tatgagctgcacgttcagaacagtgcggttggcacgaacggaaacccagatgctgccgtg
gccagactggatcaaagcatctccaccattacagccgttcaactgggacacatcaacgtg
gtgctggatcacaagagccttcgaatgcaaggagtgtctcgcctgcccaacagcacgctg
catgtggttgaaccaggctacctaggttttaaaattcacccaggagacagctgggttctg
gagacgggcagagtttatgatgtcctcatcgaagtctttgataaatccggcaacaaaata
tacctctctgataacgtgcgtatcgacaccggtttcccctccgagtacctggagctcctg
cagtcttctctgaatggatcgtatcatcgtgtcaaagcgctcagagaaggcctaactctg
attgatgcaaccctcaaagctgtcgtggatgaaactggaaggatccatgaactcgccaac
ccagtccacaatgaacaggacgtagaaatctataaccctatagttcttagtcccagtatt
ctgacgtttccatggcaacccaaggtcggagcttaccagtacacaatacaggcgacagga
gggagtggaaacttcagctggtcttcctccaacacggctgtggccactgtgaccgtgaag
ggagtcatgacgaccgctcacgacgtcggcgtcggcgtcgtttacgcccacgacctgcgc
aactcgctgcactttggccagatgaaggtctatgtggttgagcccgtggccatggacttc
gctccttgcccagtagaggccagggtgggcctggttctggatctgcccctcaggatcttc
ggcctcctggaggaggtggagaacgagcgggtcatgttgagcgactgctcccactttgac
ctgcaggtcgaggaggagaaccacggcgtcttccagctactcgacgggaggctggcgccg
ggccaggagcactgcagtggggtgagagccaaggccctggcccctggctacaccatcctc
actgtgagctacacccacggcaacgtccacctcagtgtcaagatcaccattgctgcctat
cttcccctcagagcgatcgaccccgtgtctgttgccgtggtgactctgggatcatctaaa
gacatgctgtttgagggcgggccccggccttgggttctagagccctcgaagttcttctgc
aacttgagcgccgaggacgaggccagcgtgagcctcgctctgaccggcccttcgtctcac
aactacaaccagcactgggtccgagcaacctgccgcgctctgggggagcaggtgctggag
gtgatgttggggaacaaggccagtgtgaccaatccttatcctgccgtggagctggcggtg
gtcaagtttgtgtgcgcccggccgtctcgcctcaccctggtcccagtttattccaaccca
cagctggacctgagctgcccactgctacagcagaacaaacaagtggtgcccgtttcaaat
taccgtaatcccattttggatttggctgctttcgaccaacaaggaaggaagtttgacaac
ttcagctctctgagcgtcttgtgggaatcgaccgtggtgtcgctggccagcatcgaaccc
gcgttgcccatggagctccagctggtcgaggacgacaacaagcagatgaaacttcacggg
cgacagacggttctcgtccatcatcaaacgggcattgctgccatcgcggtgacggctctg
ggttaccaggtttcacatctcgcagcagccaaagtacccagaccatatggcaccttgacc
cctgtctcggccactctggagctgctgttggttgaagatgtgaaggtttctcctgccata
gttaccatatacaaccacccagatgtgcgggcgaacttggccctgcgagaaggctccggg
cacttctttgtcaataccagcgtgagaggggtagccaacgtggtgttccaggaggcccaa
ggaaccgctcaggtcgctcccgtccacccgggggaggtgacggtgatggttcatgacatt
tgtctggcatttccagcacctgccaaagccacggtgcacgtctctgacatcctggaggtt
tacgtgagagtcgttgacaaggtggagattggcaaatctgtgaaagcttatgtgagagtc
ttggacgataataagaagcccttcccagccagctcgttccgtttcatgaatcttaaactc
aaggcggcttctgcaatcgtctctctaaaacatttagtggagcccacggaaattgattcg
gctgtcttcgtggtgaaaggtgcttctattagtcagaccactctatcggctgtggtggtg
gataaaaatgggagaaaaattgcgtctgcacctcagccaattgaggtgtttccaccgttt
aaactcatcccgaggaaaattaccctgctaattggagcaatgatgcaaatcacatctgag
ggtggccctcagcctcagtccaatatcctgttctctatttccaatgaggaagtagcttcc
gttaacggcattggccacgtcaggggagctaccgttgggaacgtcaccgtgaccggactg
gtccaagctgttgatgcggaaaccgggaaactggtcgttgtgtctcaggatcaagtagaa
gttgaggttgtgcgattgacaggcattcgaatccgagcacctatcacaagaatgaagacg
aagacacagatgcctgtatatgtgatgggtctgactaatagtcaaacacccttctccttt
ggcaacgctgtgcctggcctcaccttcacctggtccaccaccaagagagacattctggat
gtccagccaagacactctgaggctaacgtggagctgcagtcggagcacaactttggcatg
acggtgacgggaagaacgagaggacgcacggggctgaaggtggtgctcagagttactgac
ccccgtgccgggcagctggtggggagtctgctggagctcatggatgagatccagatccag
gtctatgacaagctacacatggttaatcctgaagttgaggccggggagttgctgatggct
ccaaactcagccctcaagctccaaaccagcagggacggcgtaggtgcactctcttaccgg
atgctggatttccccgaccaggctgttatcgctgaagtggatgataagggcttcctcttc
tctggctctcttaccggcatctcctccctgctgatcacctcgcaagagacctttggtttc
aatcaaactctcatcctcgctttgaaggtggtccctgtttcctatgtgcgcttcagtacc
agtcccgtgctctacacgcacaccagggagagcctgaaagccttgcccctgggcatagtg
ctcaccttcaccgtccactttcatgccggcacgggcgaagccctacacagcgccaactcc
cacctgacgttttccacaaacagagatgacttgctgcaggtgggggtcgggcccggtaac
cacactctgacggtgaggacgatcaacgtcggcctcactcttctggccgtgtgggacggt
gacaacgtgggcgtggcggactacgttccacttcctgtcggccacgccattcacccggat
gaggcccacaggctggtggtgggggacgtggtctgcttcagcgcccagttaaccagcccg
gagggtggtcatgggacttggagctcctcggctaacggcgttcttcaggtggaccctaaa
agtggtgcggcagtagccagagactctgggaccgtttctgtgtactacgagatacctggt
gtattgaagacctacagagaggtcgtcgtagaagccacgacgtggacggccgccacggcg
caggctgcacccgtcaggatcggcaaggaaactaaagtcctcctcacgaccagagggacg
ggaaccaacctcatcggaacctgttcctctgcccagactgaagctatctcacagctgcag
cccgaaacctccgtcagctgccatctcagcttcaccagtgatgagatcgacttccccgct
aatgacgtcttcaaaacacacaccagctttgactccggcgttggctcctacgcgtgctcc
ataaccttgcagccgatggcggaccagcggacccgtgcgctcagcatgtccaggtccaac
ctgctggtgaggggcggcctggagggcggcgccttctccggggaacaagtcggcgccagc
ctgcccatcgagccgggcctctactcggaccagacggagctgctgctctcgaacctccac
ccgtcggctgaactcaccgtctacggccccgccgccgccctgtccaacatggaggtgacg
tctgcttctcccaacattgctgtccaagagaaggaagtgcaccaaggcttcccgagtttc
tcaaagtacacgatcagcgccgtggaccctcatgcggcggtctccacctccgtttccatc
ggcagcgcctcctgcagccagagcatcgccatctcggtcactttgattcaagtggccgat
cccagcgccgccaggctagatgttcacactgaggggggccactccctgcacagttttata
aactgctaccagatgatgttcttcaccctgtttgctctgctggccgcgacagccatcatc
atcatcgtcctccacacagtgttcagcccacgggaccaagcgttccaacctgccttcctg
cagaggacatcgccactcatgccaggtttgggctctccgggaatgaactccttcaaccac
acgataccgaggacgccccccggcagcagccccaggtcgcgtctctattcgccagactac
aagtcctga
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