KEGG   Cyclopterus lumpus (lumpfish): 117734597
Entry
117734597         CDS       T09199                                 
Symbol
actb2
Name
(RefSeq) actin, cytoplasmic 2
  KO
K05692  actin beta/gamma 1
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03082  ATP-dependent chromatin remodeling
clum04145  Phagosome
clum04210  Apoptosis
clum04510  Focal adhesion
clum04520  Adherens junction
clum04530  Tight junction
clum04810  Regulation of actin cytoskeleton
clum04814  Motor proteins
clum04820  Cytoskeleton in muscle cells
clum05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117734597 (actb2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117734597 (actb2)
  09143 Cell growth and death
   04210 Apoptosis
    117734597 (actb2)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117734597 (actb2)
   04520 Adherens junction
    117734597 (actb2)
   04530 Tight junction
    117734597 (actb2)
  09142 Cell motility
   04814 Motor proteins
    117734597 (actb2)
   04820 Cytoskeleton in muscle cells
    117734597 (actb2)
   04810 Regulation of actin cytoskeleton
    117734597 (actb2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117734597 (actb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clum03021]
    117734597 (actb2)
   03019 Messenger RNA biogenesis [BR:clum03019]
    117734597 (actb2)
   03036 Chromosome and associated proteins [BR:clum03036]
    117734597 (actb2)
   03029 Mitochondrial biogenesis [BR:clum03029]
    117734597 (actb2)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:clum04812]
    117734597 (actb2)
   04147 Exosome [BR:clum04147]
    117734597 (actb2)
Transcription machinery [BR:clum03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     117734597 (actb2)
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     117734597 (actb2)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     117734597 (actb2)
    NuA4 complex
     117734597 (actb2)
  Chromatin remodeling factors
   BAF complex
    117734597 (actb2)
   PBAF complex
    117734597 (actb2)
   GBAF(ncBAF) complex
    117734597 (actb2)
   SWR1 complex
    117734597 (actb2)
Mitochondrial biogenesis [BR:clum03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    117734597 (actb2)
Cytoskeleton proteins [BR:clum04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     117734597 (actb2)
Exosome [BR:clum04147]
 Exosomal proteins
  Proteins found in most exosomes
   117734597 (actb2)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 117734597
NCBI-ProteinID: XP_034394659
Ensembl: ENSCLMG00005010364
LinkDB
Position
8:complement(14781614..14786034)
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagatgaaatcgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgctggagacgacgcccctcgtgctgtctttccctccatcgtcggtcgccccaggcat
cagggagtgatggtgggtatgggccagaaggacagctacgttggtgatgaagcccagagc
aagagaggtatcctgactctgaagtaccccattgagcacggtattgtgaccaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgagagttgcccctgaggag
caccctgtcctgctcacagaggcccccctgaaccccaaagctaacagggagaagatgacc
cagatcatgttcgagaccttcaacacccctgccatgtacgttgccatccaggctgtgctg
tccctgtacgcctctggtcgtaccactggtatcgtcatggactccggtgatggtgtgacc
cacacagtgcccatctatgagggctatgccctgccccacgccatcctgcgtctggacttg
gccggccgcgaccttacagactacctcatgaagatcctgacagagcgtggttactccttc
accaccacagctgagagggaaatcgtgcgtgacatcaaggagaagctgtgctacgtcgcc
ctggacttcgagcaggagatgggcactgctgcctcctcttcctccctggagaagagctac
gagctgcccgacggacaggtcatcaccatcggcaacgagaggttccgttgcccagaggcc
ctcttccagccttccttcctcggtatggagtcctgcggaatccacgagaccacctacaac
agcatcatgaagtgtgatgtcgacatccgtaaggacctgtacgccaacaccgtgctgtct
ggaggtaccaccatgtaccctggcatcgccgacaggatgcagaaggagatcacagccctg
gccccatccaccatgaagatcaagatcattgccccaccagagcgtaaatactctgtctgg
atcggaggctccatcctggcctctctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgagtccggcccctccatcgtccaccgcaaatgcttctaa

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