Cyclopterus lumpus (lumpfish): 117734694
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Entry
117734694 CDS
T09199
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117734694 (scn4ab)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117734694 (scn4ab)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Zip
Motif
Other DBs
NCBI-GeneID:
117734694
NCBI-ProteinID:
XP_034394825
LinkDB
All DBs
Position
8:1675..31641
Genome browser
AA seq
1577 aa
AA seq
DB search
CFRYLTEFVDLGNLSVLRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCL
SVFALIGLQLFMGNLRQKCVLVPPLLLGNHTSDTHLSTGNHGSETQSNNTGSSNFDYSEY
INNPENYYYQPGQLDALLCGNSSDAGVCPEGYVCLKAGRNPNYGYTSYDSFGWAYLSLFR
LMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNEATMAEA
KQKEEEYAQILEMLKKREEEQAASRAQLLEDPDGAPQKKNSSVETKGHDQEHTAMEDFAD
DQRPCPPCWYVFADIFLKWNCCGCWRWLKQYLYTIVMDPFVDLGITICIVLNTVFMAMEH
YPMTEEFEELLSIGNLVFTGIFTAEMVLKLLAMDPYYYFQVGWNIFDSIIVTMSLVELGL
ANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGM
QVFGKNYKDCVCRIALDCELPRWHMYDFFHAFLIIFRVLCGEWIETMWDCMEVSGQTMCL
IVFMMVLVIGNLVVLNLFLALLLSSFSGDNLAAPEDEGENNLQIAMNRISQAVSWAKKWI
LEQIWTITGKKNHINPDHTVVDSEEDNRTTKVILALTFVTSSQAVSEVEYLDYNHGNLTN
NDDIIPCMTVPIAEAESDFETHDNDDEEYEEEDEDEEKHSHCDESSVCSTVQKLPEAHED
GEEEEHEANTPEDCFSDKYYRRCPFLDIDTSQSRGKVWSNIRRTCFSIVEHNYFETFIIF
MILLSSGALAFEDIYLEQRRVIKTVLEYADQVFTYVFVLEMIVKWVAYGFKTYFTNAWCW
LDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPS
IFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNETSEEMFPPEDVNNRSECFALMEANLTE
IRWKNIKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSRDVESQPQYEANLYMYLYFVI
FIIFGSFFTLNLFIGVIIDNFNQQKSKLGGTDLFMTEEQKKYYNAMKKLGSKKPQKPVPR
PENKFQALVFDLVTTQLFDIFIMVLICLNMVTMMVETDEQSEEKQMILYWVNLVFIIVFT
TECTLKMIALRQHYFAVGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGR
VLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVRKEAMIDDMF
NFETFGNSMICLFMITTSAGWDGLLNPIMNTPPDCDPNIDNPGSMVRGDCGSPALGIVFF
TTYIIMSFLVVVNMYIAIILENFNVATEESADPLCEDDFEMFYETWEKFDSDASQFIQYS
KLSDFCDTLKDPLRISKPNTIKLIHMDLPLVPGDKIHCLDILLALTAQVLGDSGEMDALK
ASMEEKFMANNPSKVSYEPISSTLRRKQEEVAATVIQRAYRKHLLKRTVKLASYKYREKM
EGRRAKESPPETKGLICKRISQLYGGSEDTEEPIAGVSDEETPHTRVELQSEFLLHAAPP
LNTSNFLPVENLRESIV
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
tgtttcagatacctgacagagtttgtagatttgggaaatctttctgtgttgagaacgttc
agagtacttagagctctgaagaccatcacagtcatccctggcctaaagacgattgtcgga
gcgctcatccaatcagtaaagaagctggctgatgtgatgattctgaccgtgttctgcctg
agcgtcttcgctctgattggtctgcagctctttatgggaaacctgcgccagaaatgtgtt
ctggtaccaccgctgttgcttggcaaccacacctctgacacccacctcagtactggtaac
catggatctgaaacccaaagcaacaacacaggaagcagcaactttgactactcagagtac
atcaacaacccagaaaactactactaccagcccggtcaacttgatgctctgctgtgtgga
aacagctctgatgctggggtatgtccggagggttacgtttgtctgaaagcggggagaaac
ccaaactacggatacacaagctacgactcatttggttgggcgtacctgtctctgttcaga
ctgatgacccaggacttctgggagaacctgttccagctgacactacgagcagctggtaaa
acctacatgatcttcttcgtggttgttatcttccttggctcgttctaccttattaacctc
atcctagccgtggttgccatggcgtacgccgagcagaacgaggccaccatggccgaggct
aaacagaaggaggaagagtacgctcagatcctggagatgctaaagaagagagaggaggag
caggcggccagcagggctcagctcttagaggacccagatggagcaccacagaagaagaat
tcatctgtagaaacaaagggtcacgaccaagaacacactgccatggaagactttgcagac
gaccagaggccgtgtcctccatgttggtacgtctttgccgacattttcctgaaatggaac
tgttgtggctgctggcggtggctcaaacagtatctctacaccattgtcatggaccctttc
gttgacctcggaattactatctgtattgtcctcaacaccgtcttcatggccatggagcat
tatccaatgacagaggagtttgaggagcttctgagcattggaaatctggttttcacaggg
atcttcacagcagagatggtcctcaaacttctggccatggacccgtactactacttccag
gtgggctggaacatctttgacagcatcatcgtcaccatgagtctggtagagctgggattg
gctaacgttcagggcctatctgtgctgcgctccttccgattgatgcgagtgtttaagctg
gcgaagtcgtggccaactctcaacatgttgataaagatcattgggaactcggtgggtgct
ctggggaacctgactctggtcctggccatcatcgtcttcatctttgctgtcgtcggcatg
caggtttttgggaagaactacaaagactgcgtctgtcgcatcgcacttgactgcgaactt
ccccgctggcacatgtacgacttcttccacgccttcctcatcatcttcagggtcctgtgt
ggagagtggattgagaccatgtgggactgcatggaggtctcgggtcagaccatgtgtttg
attgttttcatgatggtcctcgttatcggaaacctggtggttctgaatctgttcctggcc
ttgttgctgagctcatttagtggtgataatcttgcggctccagaagatgagggagaaaac
aatctgcagatcgctatgaacaggatcagtcaggctgtgtcttgggcaaagaaatggatc
ctggaacaaatctggactatcactggaaagaagaaccacattaacccagaccacaccgtg
gtcgacagtgaggaagacaataggactacgaaggtaatcttagcattgacctttgtgacc
tcaagccaggcggtgtcagaggtcgagtacctcgactataaccatggcaacctgacaaac
aacgatgacatcattccctgtatgacggtcccgatcgccgaggctgagtccgactttgaa
acgcatgacaatgatgatgaagagtacgaagaagaggatgaggatgaagaaaagcactcc
cattgtgatgagtcgtcagtctgcagcaccgttcagaaacttcctgaagctcacgaggac
ggagaagaagaagagcacgaagcaaacacacctgaggactgcttcagtgacaagtattac
agacgctgtccattcctggacatagacacatcccagagcagagggaaggtctggtccaac
atcaggagaacctgtttctccatcgtagaacacaactactttgagaccttcatcattttt
atgatcctgctgagcagtggagctctggcgtttgaggacatctacttggagcaacggcgg
gtcatcaagacagtcctggagtatgcagaccaggtgttcacctacgtgtttgtgctggag
atgattgtcaagtgggttgcctatggattcaagacttacttcaccaacgcctggtgctgg
ctcgacttcctcatcgtagacgtgtctctggtgtctctgacagcaaacatcctgggatac
tctgagttgggcgccatcaagtctctgaggactctgagagctctgaggcccctgagggcc
ctctctcgcttcgagggcatgagggtggtggtaaatgccctggttggagcgatcccgtcc
atttttaacgtgctgctggtttgtctgatattctggctgatcttcagcatcatgggagtg
aatctgtttgcaggaaagttttattattgttttaacgagacgtctgaggagatgtttcct
cctgaagatgtcaacaacaggagcgagtgctttgctctgatggaggccaatttgactgag
atccgctggaaaaacataaaggttaactacgacaatgtggggctgggctacctgtcactg
ctgcaagtggccacgtttaaaggttggatggacatcatgtacgcagctgtggactccaga
gacgtggagtcccagccgcagtacgaggccaatttgtacatgtacctatactttgtcatc
ttcatcatattcggctccttcttcaccctcaatctcttcatcggagtcatcatagacaac
ttcaaccagcagaaatctaagttggggggaacagatcttttcatgacagaggagcagaag
aaatattacaacgccatgaagaaactaggctccaagaaacctcagaaacctgttccacgg
cctgagaacaagttccaggctctagtttttgacctggtgacgactcagctttttgacatt
ttcatcatggtgctaatctgcctcaacatggtgaccatgatggtggagacagacgagcag
agcgaggagaaacaaatgatcctgtactgggtcaaccttgtcttcatcattgtcttcacc
acagagtgcactctaaagatgatcgctctccggcagcattacttcgctgttggctggaac
atcttcgactttgttgttgtcatcctgtccattgtaggcctccttcttgctgacatcata
gagaaatattttgtttctccaacgctcttccgtgtaattcgattggctcggatcggccga
gttctccgtctcattcgtggagccaaggggatccgcacactgctgttcgccctgatgatg
tcacttcctgccctctttaacattggcctcctcctatttctcatcatgttcatcttctcc
atcttcggaatgtctaactttgcgtacgtgaggaaggaggccatgatcgacgacatgttt
aactttgagacgtttgggaacagcatgatctgtttgtttatgatcaccacgtcagccgga
tgggacggtctgctgaatcccatcatgaacacgccgccggactgcgaccccaacatagat
aaccctgggtcgatggtcaggggggactgtggcagcccggcattgggcatcgtcttcttc
accacctacatcatcatgtcctttctagtggtggtcaacatgtacatcgccatcatcctg
gagaacttcaatgtggctacagaggagagcgctgacccgctgtgtgaggacgactttgag
atgttctatgaaacttgggagaagtttgactccgatgcttctcagttcatacagtacagt
aagctgtcagatttctgcgacactctgaaggatccgttgaggatctccaaaccaaacacc
atcaaactgattcacatggatctgcctctggttcctggagacaagatccactgtctggac
atcctgctggctctcactgcacaggttttgggtgattcaggagagatggatgctctcaaa
gccagtatggaggagaagttcatggccaacaatccctccaaggtgtcatatgaaccaatc
agcagcactctgcggaggaaacaggaagaagtggcggcgacggtgatccagagagcatat
aggaaacacctcctgaagcggacggtcaaattggcatcctacaaataccgagagaagatg
gagggacggcgagccaaggagtctccgcccgagacaaaaggacttatctgtaaacgcatc
agtcagctgtatggaggcagcgaggacacagaggagcccatcgcaggtgtttcagatgag
gagactcctcacactcgggtggagcttcagagtgagtttcttctccatgctgctccaccc
ctcaacacctccaacttcctgccggttgagaacctgagggagtctattgtctga
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integrated database retrieval system
