Cyclopterus lumpus (lumpfish): 117735224
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Entry
117735224 CDS
T09199
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117735224 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117735224 (smcr8b)
Membrane trafficking [BR:
clum04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
117735224 (smcr8b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
117735224
NCBI-ProteinID:
XP_034395625
Ensembl:
ENSCLMG00005000742
UniProt:
A0A8C2YVY5
LinkDB
All DBs
Position
1
Genome browser
AA seq
911 aa
AA seq
DB search
MIGSPDLLAFTGTEGFGEEDREGLPEELSVPLLPPSNPWTSSAQFHRDFILVAEFSEQVG
PRPVLTIPDAPEVIGSFDLNHFSVRLMSVDYQASGPCQTPPTSPGPRLNFSEDSKVVLGD
SAEDAFAYVHHVTLYDLEARGMVRPFCMAYVCSDRTKLMENFSELSTGFSKASESLKTGN
RQAFSMELQRRLQELEYTRLTLLQVTEPPMATNGFAVGGEKADELEAVEHSILHHRDLVR
QVTSYPNRKLKQPDFLPYDPADYSLADPIALLPPERGPSSSSSASCRSERRLKPLEELCH
DYFLTLMKEQLADTERRLRGNRSSLRTARVTRSLSRRITLINFLFDLWRPEDGDEEERES
AEAEPQRATASESAVEAFQSEPKSLESFFSCVEEISIKLEAGDAGTVTPDPDVATEMTGS
VSSGDSIEVLGTEKSYRTQHGGAGSDSRETPVGMTDTYCRRAAADSGVRSGRTYARRANS
DDSIEVLSTTESIFPDDLTAITEEEAEHQPLSNGFEEEEEEEETRAECGSDNVLKEEKAP
DAATSVNDENKEAVREDDGRVKQITVRGEVTVKKGKVVECLKSNRVHEDNRPEKMSKLLQ
VEAVASTPHWSEFRQTVRSLPDLHVHPPPPGVTAEADRWSPPSAPLRLLSVDEGSDCTSV
AGSSDPLSLAQSVPGSARSDQRRRRKAALRALRFLKQNSFSQHAVFCLLSGRPLVVIGGD
GSLVRKLVEALSLFLPAPGPDGTALMMCLTSPLQLSDLLTWRLMGIHRCSSSSSASIVHS
LTRYSRYLALLDLDQRTLRCPSYSGSLVGRLADPHTGISRGLTYLLHLESCLTALAHRAM
LHTFNPALRHPHAGAEGKDSPSTPVPCSSEHDLRVMHFLCDLIKRRHAGRGPPVLRISYN
SMHLHRNTYAA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggtctccggacctgctggccttcaccggcactgaggggttcggggaagaggac
cgggagggtctacctgaagaactctcggtcccccttttacctccatccaacccctggacc
tcctccgcccagttccacagagacttcatattggtggctgaattctctgagcaggtggga
cccagaccggtactgacgataccggacgcccccgaggtcatcgggtcgtttgacctcaac
cacttctccgtccgcctcatgtccgtggactaccaggcgtccggcccctgccagacccct
cccacatcccccgggccgcgcctcaacttcagcgaggactccaaagtggtcctgggagat
tcggcggaggacgcgttcgcgtacgtccaccacgtgaccctgtacgacctggaggcccgg
ggcatggtgcgtcccttctgcatggcgtacgtgtgctcggaccggacgaagctgatggag
aacttctctgaactgtcgacgggcttctctaaggcctccgaaagcctcaagacgggcaac
agacaggcgttttccatggagctgcagagaagattacaggagctcgagtacacaaggttg
actctgctgcaggtgacggaacctccgatggcgaccaatgggttcgcggtggggggagaa
aaggcagatgagcttgaagccgtagagcattcaatcttgcatcacagagacctcgtccgc
caggtcacttcctacccaaacaggaagctgaaacaacctgacttcctgccttacgacccg
gccgactactccctcgctgatccgattgcgctactgcctcctgagcgcggcccctcctcc
tcctcctccgcctcctgccggtctgagcgccgcttgaagcctctggaggagctttgccac
gactacttcctgacactgatgaaggagcagctcgccgacacggagcgccgcctgcgcggc
aacaggagctcgctgcgcaccgctcgtgtcacgcggtcgttgtccaggaggatcacgctc
atcaacttcctgttcgacttgtggcgcccggaggacggggatgaggaggagagggagagc
gccgaggcggagccgcagagggcgacggcgagtgagagcgccgtcgaggcgtttcaatcg
gaaccaaagagcctggagtcattcttctcctgcgtggaggagatctccatcaaactggag
gcgggagacgccggaacagtgacccctgaccctgacgttgccacggagatgacgggaagc
gtgagcagcggcgacagcattgaagtgctcgggactgagaagtcctaccggacgcagcat
ggcggcgccggatctgacagcagagaaacgccggttgggatgacggacacctattgcagg
cgagccgccgcagattctggcgtcagaagcgggcgaacgtacgccagacgagccaacagc
gacgacagcatcgaggtactcagtaccaccgagtccatctttccggacgacctcaccgcc
atcacagaggaggaggcggagcaccagcctctgagcaacggctttgaggaggaggaggag
gaggaggagacgcgggccgagtgtggatctgacaatgtcctcaaagaggagaaggcaccg
gatgcagctacctcagtaaacgatgaaaacaaagaggctgttcgggaagatgacggccgt
gtgaagcagataactgttcgtggtgaggttaccgtgaaaaaggggaaggtcgttgaatgt
ttgaagagcaatcgggtccatgaagacaaccgtcctgagaagatgtccaaactactgcaa
gtggaggcggtggcgtcgacgcctcattggtctgagttccgtcagactgtgcggtcgctg
ccggacctccatgtccaccccccccctcccggtgtcacggcggaggcggaccggtggtct
ccgcccagcgctcctctcaggctgctgagcgtcgacgaggggtccgactgcaccagcgtc
gccggctcctcagacccgctgtctctcgcccaaagcgtccccggcagcgcccgctcagat
cagaggaggaggaggaaggcggcactcagggccctcaggttcctcaaacagaactcgttc
tcccagcatgccgtgttttgtctcctgagcggtcggccgctggtcgtcatcggcggggac
gggagtttggtcaggaagctggtggaggcgctgagcctcttcctgcccgctccgggtccc
gatggaaccgctctgatgatgtgtctgacctcgccgctccagctgagcgacctgctcacc
tggaggctgatggggatacacaggtgctcctccagctcttcggccagcatcgttcactct
ctgactcgctacagtcgctacttggcgctgttggatctggaccagaggacgctgcgctgt
ccatcctactccggctctctcgtcggcagactggccgaccctcacaccggcatcagccga
ggcctcacctacctgctgcacctggagagctgcctgaccgcgctggcccaccgggccatg
ctgcacacgttcaatccggcgttacgtcatccgcacgccggcgcagaaggaaaggactcc
ccgtccacgccagtgccttgcagcagtgagcacgatctgagagtgatgcatttcctgtgt
gacctcatcaaacggcgccacgcgggacgtggaccaccggttttgaggatctcgtacaac
tcgatgcacctgcacagaaatacgtatgcagcgtaa
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