Cyclopterus lumpus (lumpfish): 117735637
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Entry
117735637 CDS
T09199
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00514
Other types of O-glycan biosynthesis
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117735637 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117735637 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117735637 (lfng)
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
117735637 (lfng)
Glycosyltransferases [BR:
clum01003
]
Glycan extension
O-Glycan
117735637 (lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
117735637
NCBI-ProteinID:
XP_034396301
Ensembl:
ENSCLMG00005012233
UniProt:
A0A8C2ZBI5
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All DBs
Position
8:4448746..4455742
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AA seq
370 aa
AA seq
DB search
MLSTSNKKTAVSVGSAAGLCLLLLLLLVAAQHHRVQVQDDASAAAADAGTRSLLQDAAQE
EHTKKGFSAYFTKLTRARREVEKPGRSSAYGADPPPAEDIGADDVFIAVKTTKKFHQSRL
NLLLDTWISRNVQQTYIFTDGEDAELKKKIGSHAINTNCSAAHSRQALSCKMAVEYDKFI
ESGKKWFCHVDDDNYVNVRTLVKHLSQYPHTQDMYIGKPSLDRPIEATERLGDNKMKPVN
FWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTVGYIIESVLGVPLTRSN
LFHSHLENLQQVSRTEIHKQITLSYGMFENKSNIINFKGAFPVEEDPSRFKSVHCLLYPD
TPWCPPQVAF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaactagcaataagaagaccgccgtctccgtgggcagcgcggcgggcctctgc
ctgctgctgctgctgctgctggtcgccgcgcagcatcaccgcgtccaggtgcaggacgac
gcgtccgcggcggcggcggacgccggcacgcgctctctgctccaggatgccgcgcaggag
gagcacaccaagaagggcttctcggcgtacttcaccaaactgacccgggcacgccgggag
gtggagaagcccgggcgctcctccgcgtacggcgccgacccgcctccggccgaggacatc
ggcgccgatgacgtcttcatcgcggtgaagaccaccaagaagttccatcagtccaggctg
aatctgctcctggacacgtggatctcgagaaacgtgcaacagacgtacatcttcacagac
ggggaggatgcagagctaaaaaagaaaattgggagtcacgcaatcaacacaaactgctct
gcagctcacagtcgacaagctctctcctgcaagatggcggtggaatatgataaattcata
gagtcagggaaaaagtggttctgtcacgtcgacgacgacaactacgtgaacgttcggacc
ctggtgaagcacctgtcccagtacccccacacccaggacatgtacatcggtaaacccagt
ctggaccggcccatcgaggccacggagaggctgggggacaacaagatgaaaccggtgaac
ttctggttcgctaccgggggagccggcttctgtgtgagccgagggctggcgctgaagatg
agcccgtgggccagcggcggccacttcatgaacacagcggagaagatccgtctgcccgac
gactgcactgtgggttacatcatcgagtcggttctaggggttcctctgacccgcagcaac
ctgtttcactcccacctggagaacctgcaacaagtgtccagaacggagatacacaagcag
atcaccctcagttatgggatgttcgaaaacaagagtaacatcatcaatttcaaaggggct
tttcctgtggaggaggatccatcaaggttcaagtcggtgcactgtctcctgtacccggac
accccctggtgtccccctcaggttgccttctag
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