Cyclopterus lumpus (lumpfish): 117735841
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Entry
117735841 CDS
T09199
Symbol
fbxw7
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117735841 (fbxw7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117735841 (fbxw7)
04121 Ubiquitin system [BR:
clum04121
]
117735841 (fbxw7)
Membrane trafficking [BR:
clum04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117735841 (fbxw7)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117735841 (fbxw7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
F-box
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_SPT8
PQQ_2
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_LRRK2
Ge1_WD40
Beta-prop_NWD2_C
WD40_like
Beta-prop_IFT140_1st
KNTC1_N
CDtoxinA
eIF2A
Beta-prop_IFT140_2nd
Beta-prop_IP5PC_F
PALB2_WD40
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
117735841
NCBI-ProteinID:
XP_034396625
Ensembl:
ENSCLMG00005010561
LinkDB
All DBs
Position
1:complement(19485014..19587127)
Genome browser
AA seq
848 aa
AA seq
DB search
MSKSMCGCGCSFISSLMKRLGRTACCSDLFFSHTSEQLQRLATGCPPQPKNAKPFSSSDS
LGKVQEVASWLLEMNQDLLSGGSSSRRSRGSGGPAVRGNASSTARAPQQAAEEGDEDEHM
NRVVEEEEQLQQRPEASQVDGEREQPWAPSESGASNGPRGEEEDEEGPPNEVNGGEKGAR
WMWGAEQRRLRGQPLGEEDEEEEEEENNNSSSHQEEEEAEERTEGGQGREEDEREEGEEE
EEEDEDEEEMDQDSDEFEHSAESGREEEEEEEGDREEGLRSPSLRNNVSAPNNNRDSGCT
HQSSSNKKMKRKLDHGPEVRSFPSGKKPCKGPEYPSPTGIVPCPSTPTTFGHIRTANCQG
QQRRRITSIQPPTGLQEWLRTFQSWTGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRD
FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCREEGIDEPLPLKKR
KIVKPGFTHSPWKSAYIRQHRIDTNWRRGDLKSPKVLKGHDDHVITCLQFCGNRIVSGSD
DNTLKVWSAITGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG
HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAY
DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG
HQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVIT
SSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLV
LDFDVDMK
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcgatgtgtggttgtggctgcagcttcatctcctctttgatgaagagattg
ggccgcacggcgtgctgctcggatctcttcttcagccatacttcagaacagctgcagaga
ctggccaccggctgcccacctcaaccaaagaatgccaagcccttctcctcctcagacagc
ctagggaaggtccaggaggtagcaagctggcttttggaaatgaaccaggatctgctgtcg
gggggcagcagcagcaggcggagtcgggggtcggggggtccggcagtgcgaggtaacgct
tcctccacggcccgggcaccccagcaggcagcagaggagggtgatgaagatgagcacatg
aaccgggtagtcgaggaggaagagcagctgcagcaaaggcctgaggcgtcgcaggtcgat
ggcgagagagaacaaccatgggcgccaagtgagtcgggagccagcaacggccctcgggga
gaggaggaagacgaggagggtccgccaaacgaagtgaacggaggagagaaaggagcccga
tggatgtggggggcagagcagaggcgactgcgtggccagccgctgggcgaagaggacgag
gaggaggaagaggaagagaacaacaacagcagcagtcaccaagaggaggaggaggcggag
gagaggacagagggagggcagggaagggaggaagacgagagggaagagggcgaggaggaa
gaagaggaggatgaggacgaggaagagatggaccaagacagtgatgaatttgaacattct
gcggagagtgggagggaggaggaagaggaggaggaaggagacagggaggaagggctgcgg
tctccctctctcaggaacaatgtgtctgcccccaataacaaccgggactcgggttgtact
caccaaagctcttccaacaagaagatgaagagaaagttggaccatggccccgaggtccga
tctttcccttcaggaaaaaagccctgcaaaggcccagagtatccgagcccgacaggaatc
gtcccatgtccatccacacccaccacatttggccacattagaacagccaattgtcaaggg
cagcagagacggcgcatcacctcaatccagccacccacgggtctccaagaatggctccga
acatttcagagctggactggcccagagaagctgctggcgctggatgagttgattgacagc
tgtgagcccacacaagtcaagcatatgatgcaggtgatcgagccgcagtttcagcgagac
ttcatctccctgctgcccaaagagctggctttgtacgtgctgtcattcctggaaccgaag
gacctccttcaagcagcccagacgtgtcgctactggcgcatcctggcagaagacaacctg
ctgtggagggagaaatgcagggaagaaggcatcgatgagcctctgcccctcaagaagagg
aaaatcgtcaagcctggcttcacccacagcccctggaagagtgcctacatcaggcagcac
agaatagacaccaactggaggagaggggacctcaaatcacccaaggtgctgaaaggtcat
gacgaccacgtgatcacctgcctccagttctgtggcaaccgcatcgtcagcggctccgac
gacaacacgctcaaagtctggtcggccatcacaggaaagtgtctgcgcacgttggtgggc
cacacggggggcgtgtggtcatcccagatgcgagacaacattattatcagcggctccact
gatcgcacactcaaggtctggaacgcagagacaggcgaatgtatccacaccctctatggg
catacctcaacagtgcgctgcatgcacctccatgagaaaagggtggtcagtggctcccgt
gacgccacgctgcgtgtctgggacattgagacgggtcagtgtttacacgtgctcatgggc
cacgtggcggccgtgcgatgcgtccagtatgacggccggcgggtggtcagcggtgcctac
gacttcatggtgaaggtctgggaccctgagacggagacctgcctccacacgctgcagggc
cacaccaacagagtgtactcgctacagtttgatgggatccacgtggtgagtgggtctttg
gacacgtccataagggtctgggacgtggagacgggcaactgcatccacacgctgacgggg
catcagtccctcaccagcggcatggagctcaaagacaacatcctggtctcaggcaacgca
gactccactgtcaagatctgggacatcaagacgggccagtgcctgcaaacactgcaaggt
ccccacaagcaccagagcgccgtgacgtgcctccagttcaacaagaactttgtcatcacc
agctcggacgacggcacggtcaaactgtgggacctgaagacgggcgagttcatccggaac
ctcgtgaccctggagagcggcggcagcggcggcgtggtgtggcgcatccgagcctccaac
accaagctggtgtgcgcggtgggcagccgcaacggcacggaggagaccaagctgctggtg
ctggactttgacgtggacatgaagtga
DBGET
integrated database retrieval system
