Cyclopterus lumpus (lumpfish): 117735930
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Entry
117735930 CDS
T09199
Symbol
rchy1
Name
(RefSeq) RING finger and CHY zinc finger domain-containing protein 1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04115
p53 signaling pathway
clum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117735930 (rchy1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
117735930 (rchy1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117735930 (rchy1)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117735930 (rchy1)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117735930 (rchy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
Prok-RING_4
zf-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117735930
NCBI-ProteinID:
XP_034396740
Ensembl:
ENSCLMG00005017872
LinkDB
All DBs
Position
9:complement(8316575..8320595)
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AA seq
283 aa
AA seq
DB search
MASPAGCEHYVRSCSLKAPCCGKLYVCRLCHDAEENHQMDRFKVVEVQCSECQTVQQAQQ
NCQECDAQFGEYYCDICHLFDKDKKQYHCQPCGICRIGPREKYFHCEKCNLCLAQDLRGN
HKCVENVSRQNCPVCMEDIHTSRIGAHVLPCGHLLHKTCFDDMVRTGAYRCPLCMHSAWE
MEDHWDQIDKEISQSPMPTEYQGATVKIICNDCQAHCTAPFHVLGMKCSDCGSYNTAQDG
GLIQQPQQQQQEQQQPEQDPEENEAETATEPELQDQPQLPTPD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccctgcgggttgtgagcattacgttcgcagctgttcattaaaagcaccttgc
tgtggtaagctgtatgtgtgtcggctgtgccatgatgcggaggagaaccaccagatggat
agattcaaagtcgtggaggtgcagtgctccgagtgtcagacggtgcaacaggcacagcag
aattgccaggagtgtgatgcgcagtttggggagtattactgtgacatttgccacttgttt
gataaggataagaagcagtaccactgtcagccctgtggaatatgcaggattgggcccagg
gagaagtatttccattgtgagaagtgcaatctgtgtttagctcaggatctgcggggaaac
cacaagtgtgttgaaaatgtttcgaggcagaactgtccagtgtgtatggaggatattcac
acgtccagaattggtgcacacgttcttccatgcggccatcttttacacaagacctgcttt
gatgacatggtcagaacaggagcgtatcgctgtcccctgtgtatgcactctgcctgggaa
atggaagaccactgggaccagatagacaaagagatttcccagtcaccgatgcccactgaa
taccagggtgcaactgtcaaaattatatgtaacgactgccaagcccactgcacagcgcct
tttcacgtgctggggatgaagtgcagcgactgtggctcctacaacactgcacaggatggg
ggactcatccagcagcctcaacaacaacaacaggagcagcagcagccagagcaggaccct
gaagagaatgaggcagaaacagccacagagccagagctgcaagatcagcctcagttgccg
acgccagattaa
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