Cyclopterus lumpus (lumpfish): 117735999 Help Entry 117735999         CDS       T09199                                  Symbol traf2a Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism clum  Cyclopterus lumpus (lumpfish) Pathway clum04010   MAPK signaling pathway clum04137   Mitophagy - animal clum04141   Protein processing in endoplasmic reticulum clum04210   Apoptosis clum04217   Necroptosis clum04621   NOD-like receptor signaling pathway clum04622   RIG-I-like receptor signaling pathway clum04920   Adipocytokine signaling pathway clum05132   Salmonella infection clum05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:clum00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     117735999 (traf2a)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     117735999 (traf2a)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     117735999 (traf2a)   09143 Cell growth and death    04210 Apoptosis     117735999 (traf2a)    04217 Necroptosis     117735999 (traf2a)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     117735999 (traf2a)    04622 RIG-I-like receptor signaling pathway     117735999 (traf2a)   09152 Endocrine system    04920 Adipocytokine signaling pathway     117735999 (traf2a)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     117735999 (traf2a)   09171 Infectious disease: bacterial    05132 Salmonella infection     117735999 (traf2a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:clum03019]     117735999 (traf2a)    04121 Ubiquitin system [BR:clum04121]     117735999 (traf2a) Enzymes [BR:clum01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      117735999 (traf2a) Messenger RNA biogenesis [BR:clum03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      117735999 (traf2a) Ubiquitin system [BR:clum04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     117735999 (traf2a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_4 zf-C3HC4_2 zf-RING_5 zf-C3HC4_4 Sina_ZnF Tropomyosin zf-RING_6 TRAFD1-XIAF1_ZnF MATH GHMP_kinases_C Motif Other DBs NCBI-GeneID:  117735999 NCBI-ProteinID:  XP_034396854 Ensembl:  ENSCLMG00005004208 LinkDB All DBs Position 9:complement(26952388..26972123) Genome browser AA seq 568 aa AA seqDB search MAAQEQSPPSSLEGNKPGFPKKILANSLEDKHLCNSCQKVLRRPLQAQCGHRFCSFCFNK IVSSGPQKCSACIKEDLFEEPTSILKQGGAFPDNAARREVEALAAVCPNEGCTWTGTIKE FEASHEGKCDFMIILCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE ICPKYPMVCEGCAKKKIPREKYVDHIKFCSKCKAPCRFHVVGCDTSVEKEKLHDHERQCS YEHLNLLLHFIMGIKVSLESLQPQSLEVASHKLQELHQSLRDLELKMSQMGGAGGGATAG APALGACAPTLATSFTPLPSAALQLWSEKAKVAELSRRCQELELKVGTFENIVCVLNREM ERSCTTMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEMEGKMREMSAATYDGI FVWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVV MRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDVSSSSFQRPVSDMNIASGCPLFC PLSKLDSKNSYIRDDTIFIKAIVDLTGL NT seq 1707 nt NT seq  +upstreamnt  +downstreamnt atggctgcacaggagcagtctccaccatcttccctggaaggcaacaaacccggcttccca aagaaaattttggccaacagcctcgaggacaagcatttgtgcaactcgtgccagaaagtg ttgagaaggcccttgcaagcccaatgcggtcaccgcttttgttcgttctgtttcaacaaa attgtgagttctgggccacagaagtgcagcgcttgcatcaaagaagacttgtttgaggag cccacctccattctcaagcaaggcggtgctttccccgacaatgcggctcggagagaagtg gaggccttggcggccgtctgtcccaacgaaggatgcacgtggacggggaccattaaagaa tttgaggccagccacgagggcaaatgtgacttcatgatcatcctgtgtccgtcctgcaaa gagctgatgagggccaacgagcaggagcgccacaacgagagagaatgtccggagaggacg ctcaactgcaaatactgcaaggagcccttcctgttgaagaacatcaaggcccatgatgaa atctgtccaaagtacccgatggtttgcgaaggctgtgcgaagaaaaagatccccagagaa aagtatgtggaccatattaagttctgcagtaaatgtaaagcaccatgcagatttcatgtt gttggctgcgatacatctgtggagaaagagaagctccacgaccacgagcggcagtgttcc tacgagcacctcaacctgctcctgcacttcatcatgggcatcaaggtgagcctggagagc ctgcagccccagagcctggaggtggccagccacaagctgcaggagctccaccagtccctc agggacctggagctgaagatgagccagatgggcggggccgggggcggggccacggccggc gctcccgcactgggcgcgtgcgccccgaccctggccacctccttcaccccgctgcccagc gccgcgctgcagctctggagtgagaaagccaaggtggccgagctgagccggcgctgccag gagctggagctcaaagtgggcacgttcgagaacatcgtgtgcgtcctcaaccgggagatg gagcgctcctgcaccaccatggaggcctacaaccgccagcaccggctggaccaggacaag atcgagatcctcaacaacaaggtgcgtcagctggagaggacggtgagtctgcgggacctc tccatcgtggagatggaggggaagatgagggagatgtcggcagccacgtacgatggcatc tttgtctggaagatctctgatttcaccaagaagaggcaggacgccgtggcgggccgcgcc cccgccatgttctctcccgccttttacaccagtaaatacggctacaagatgtgcctgcgg atctacctgaacggagacgggacgggccgcggcacccacctgtctctgttcttcgtggtg atgagaggacacagcgacgcgctcctcaagtggccttttaatcagaaggtcaccctgatg ctgctcgaccagaacaacagggagcacatcatcgatgccttccggcccgacgtctcctcc tcgtccttccagaggcccgtcagcgacatgaacatcgccagcggctgcccgctcttctgt ccgctctccaagctggactccaagaactcctacatacgcgacgacaccatcttcatcaag gccattgtagacctcactgggctctag

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