KEGG   Cyclopterus lumpus (lumpfish): 117736398
Entry
117736398         CDS       T09199                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clum03400]
    117736398 (ercc6l2)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    117736398 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C RHH_ERCC6L2 ResIII DEAD VIGSSK HDA2-3 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 117736398
NCBI-ProteinID: XP_034397603
Ensembl: ENSCLMG00005015873
LinkDB
Position
9
AA seq 1602 aa
MASPSAVEKATWREGDTCLAPDPRDGSLRETTIKRLTSTSHDHDMTAWVVFTDHSKDEEE
EEEEEEEAVPVSKLTRPGVNHFTQEKPLFPSSVTDTRLCVPLLLSDVDGDRVPYTINRYL
RDYQREGIGFIYNNYICSRGCILGDDMGLGKTVQVIGFLAAVLHKTGTWEDIKNNRPQFL
QSQMPSKQSKPNKVFLIVAPLSVLYNWKDELDTWGHFQFVVVHGLKKEEELARIKKGRIE
IALTTYETLRLCLDQFNNIDWSAVVVDEAHKIKNPNSQITQAMKDLKCKIRVGLTGTILQ
NNLEELWCVMDWAIPGCLGILGHFKNKFSDPIERGQRHSATKRVLATGRKTVRALVKKIS
CWFLRRTKALIREQLPKKDDRVVYCSLTDFQETVYRTVLDTEDVTLMLRSSEKCDCQSGR
TRSRCCYETNTEGVQMKGLYFSYLAILRKVANHTALLQSTAGSSKKQEKYVGAICAKVFQ
KFPDFLQRCKDEAFEALSDPMYSGKMKVLQKLLKFYRQRRDKVLIFSLSTKLLDVLESYC
MAEGLDYSRLDGATKAKDRVQIVKEFNSSCHINLCLVSTMAGGLGLNFVGANVVVLFDPT
WNPANDLQAIDRAYRIGQCRDVTVLRLISLGTVEEVIYLRQVYKQQLQCSVMGKESSRRY
FEAVQGHGVHKGELFGINNLFRLQTKGTCLTRKILEREGRVEAGVMTSSTHTGDEKEEET
KAVSEPADSPATDGPVPNNESAKEKGSASKVSRGVLDFSSGSEEDEDEQGLKRKASSPSA
IDGNTSGNAVTGPGRMSLLQHGFSRLLERVKGKPELAEGDSSDTVDESPFEEDAEDQKME
ATSSGITKNSNTRNGPVCFPKFGPKTWDFSSGSDREDGDNGDKKTQERFPLLKKSDDAVR
KRQDLKGRANKKTPVDEESDEKASSNKKKPNKVKTPVPKVRCFEGYSDESDDLDIEAKTW
PRRDTLNSHGPRGRERLDRNRKRQSAGVRDNARSKYTEDIETFTSSEDEHTPVKKGRSTG
CHFTSPQMERSRVELAKDGRRASTTNRTEREAAAPKAVSFTNLKSQTSPASKGKDRTIDS
VLGGVHEVVYTHSNQRVVGGSKAEERISRAAVRDVFERKMYSQLPANHLLGTQESFSASP
PASQPFSPPVRPQKPSVDHPVTFFSKSVHHTGHATCIIGETPQAIRRQQLEEMAEKFKFP
SVHQFAVEILRGNSTRRLVWLREFYTSLNLPDLANTVTNNFPQHDSAQTSSSTVTSSTAF
KRTAKSHTHTRTPQKDVPKAKREPKHTEKNPKPKTKPEASHSVSVPQKKSRHPQNDDPEP
QTQPRNPQNDVLSAQKKQKVAENNVLEPLSDVMSLESEEQEETACSARGHKRTKRGSVSR
SGAFRAGSGGLGLDQASSSGLGSGKATAFHNCTDRRIPSSPDLSHGRSTALSKPTAQERE
KEQKTSSRTSEPFQGQRENSQTSPPEQAKSTSSRRSLLTDLIGDTSILDDLLKPKLRGAQ
QRGPPKSPPALSSVSVLNTDPGSAALIDSPHKPPVHQVVPKGSRKDFWDILNEGNEDSIN
RLTDPAEVHRVCINTNFAARGRSGEEERKSLWKTNEKFLWKK
NT seq 4809 nt   +upstreamnt  +downstreamnt
atggcttcaccttctgcagttgaaaaagcaacatggcgtgaaggtgacacttgtctggct
cctgacccgagagatggctccctgcgagaaaccaccattaaaagactgacctccacctct
catgatcacgatatgacagcgtgggtggttttcactgaccatagtaaagatgaagaagaa
gaagaagaagaagaggaggaagctgtacctgtctctaaactcacgagaccaggcgtgaat
cacttcacccaggagaaacctttgtttcccagcagcgtcacagacaccaggctatgtgtc
cccttattgttgagtgatgttgatggggacagagtcccctacaccatcaacagatacctg
agggattaccagagagaaggaatcgggttcatttacaacaattacatctgttccagaggt
tgtatcctgggggacgacatgggcctgggaaaaactgtacaggtcattggtttccttgcc
gctgtactgcacaaaacaggcacatgggaggacatcaagaacaacaggcctcagtttctg
cagagtcagatgccttccaagcaaagtaaacccaacaaagtgttcctgattgtggccccg
ctgtcggtgctttataactggaaagatgagctggacacatggggccacttccagtttgtg
gtggttcatgggctgaagaaagaggaggagctggctcgcatcaagaaggggcgcatcgag
atcgccctcactacctatgaaactctgcgtctttgtctggatcagtttaataacatagac
tggtctgctgtggttgtggatgaggcccacaagataaagaatccaaactctcagatcact
caggccatgaaggatctgaaatgtaagatcagagttggcctcactggcaccatcttacag
aacaacctagaggagctgtggtgtgtcatggactgggccatacctggttgtctcggcatc
ttaggacatttcaagaacaagttttcagatccaattgagcgagggcagaggcacagtgca
accaaacgtgtcctggctacagggaggaagaccgtcagggccctggtgaagaagatctcc
tgctggttcctcagaaggacgaaagctctcatcagggaacaactgcctaagaaggatgac
agggtggtgtattgctctctgacagactttcaggagactgtgtaccggacggtgctggac
actgaagatgtgacgttaatgctgaggtcttcagagaaatgtgactgtcaaagtggacgc
acccgcagccgctgctgctatgaaacaaacacggaaggtgtgcaaatgaaggggctgtac
ttcagttatttggccatattgaggaaggttgccaaccacacagcactgcttcagtccact
gcaggctccagcaagaaacaggagaagtacgtgggtgccatctgtgcgaaggtattccag
aagtttccagactttttgcagagatgcaaagacgaagcatttgaagctttgtcggacccg
atgtacagtggaaagatgaaggttttgcagaagctgctgaaattttaccgtcaaaggaga
gataaagtgcttattttttctctctcaaccaagctgttggatgtgctggagagctactgc
atggcagaagggctggactacagcaggttggacggagccaccaaagccaaagacagagtc
cagattgtcaaagagttcaacagctcctgtcacatcaacctctgcctggtttccaccatg
gcgggtggtctcggtcttaacttcgtaggggccaatgtggttgtgctctttgaccccacg
tggaacccggccaatgacctccaagctattgacagggcatatcgtattggccagtgcagg
gacgtgactgttcttaggctgatttcattggggactgtggaggaggttatctacctcaga
caagtgtacaaacagcaattgcaatgctccgttatgggcaaggagagttctcggcggtac
ttcgaggcagtgcaggggcatggtgtccacaagggggagctgtttgggatcaacaacctc
ttccggctgcagaccaaagggacatgcctgacccgcaagatactagagcgagaaggacga
gtggaggccggcgtgatgaccagcagcacccacacaggcgacgagaaggaggaggagacg
aaggcagttagcgaacctgcagactctccggctacagatggccctgtaccgaataatgaa
tcagccaaggagaagggaagtgcatcgaaggtctccagaggggtgttggacttcagcagt
ggaagtgaagaggatgaggatgagcagggtcttaagaggaaggcgtcaagccccagtgca
atagatggcaacacgagtgggaatgctgtaactggtcctggtcgaatgagtctcctccag
cacggtttctcgaggctcctcgaaagggtcaaaggaaaaccagagttagcagaaggggac
agtagtgatactgtcgatgaaagccccttcgaggaagatgctgaggatcaaaagatggag
gctacctcctctggcatcaccaagaactccaatactagaaatggcccagtctgtttccct
aaatttggacccaaaacgtgggacttctctagcggttcagaccgagaagacggggacaat
ggcgataagaagacacaagagaggtttcctctgttaaaaaaaagtgatgatgctgtaaga
aagagacaggacctgaaagggcgggcaaataagaaaactccagtggacgaggaaagtgat
gaaaaagcctcatcaaacaaaaagaaacctaacaaggtcaaaactccagttccaaaagtg
cgctgctttgaaggctactccgatgaatctgatgacttggacatagaggcaaagacgtgg
cccaggagggacactttaaattcacatggcccccgcgggagagaaaggctagaccgcaac
agaaagaggcaaagtgctggtgttagagacaatgccagatccaaatacacagaagacata
gagacattcacgtcttcagaagatgaacacacgccagttaagaaggggagatctacagga
tgtcacttcacatctccacagatggaaagatccagagttgagttggcaaaagatggacga
agagcttcaacaaccaacaggacagagagagaagcggcggcgcccaaagctgtttcattt
acaaatctaaaaagtcagacgtcccctgcgtccaaaggaaaggatagaactatcgacagt
gtgctagggggcgtacacgaggtggtgtacacccactctaaccagcgcgtggtgggcggg
agcaaagcagaggagaggatcagcagagcagctgtgcgagacgtgtttgagcgcaagatg
tactctcagctgccggccaatcaccttttaggcacccaagagagcttctcggcgagccca
ccagccagtcagcctttctcccctcctgtcagaccacagaagcccagtgtggaccatcca
gtcactttcttcagcaagagtgtgcaccacaccggacacgccacgtgcatcatcggagag
actccccaggccatacgcaggcagcagctggaggaaatggcagagaaattcaaattcccc
tcagtccatcagtttgcagtggaaattctaagaggaaactcaacccggagactggtctgg
ctacgggagttttacacttcactgaacctccctgacctggccaacacagtcacaaacaac
ttcccacaacatgattcagcacagacctcctcttcaactgttacctcctcaacagccttc
aaaagaaccgcaaagtctcacacacatacccgaaccccacaaaaggatgttccaaaagcc
aagagagagcctaaacacactgagaagaatcctaaacctaaaactaagcctgaagcctcg
cacagtgtttctgtgccacagaagaagtctaggcacccacaaaatgatgatcccgaaccc
cagacacagccgagaaacccacaaaatgatgttctgtcagcccagaaaaagcaaaaggtc
gcggaaaataatgtgctagaacctctaagtgatgttatgagccttgagtcagaggagcag
gaggagacggcctgcagtgccagaggacataagaggacaaagaggggtagtgtttctcgt
tctggagccttcagagctggtagtggtggtcttggcttggatcaggccagcagcagtggt
ctggggtctgggaaggccacagctttccacaactgcacagacagacgaatcccttcttct
ccggacctcagccatggcaggtccaccgcattatccaaacccacagcacaggaaagggag
aaagagcagaaaacgtcctccaggactagtgaaccctttcagggccagagagagaattct
caaacgtctcctcctgaacaggccaagtccacctccagccgtcgttccctcctcacagat
ctgataggagacacgtcaatcctcgacgatctgttaaaacccaaactcagaggtgcgcaa
caaaggggtcccccaaaatcaccccccgcactctcctccgtgtccgttctcaatactgac
cctggttctgcagccctcatagactctccacacaaaccgcctgtacaccaggtggtacca
aagggcagtcgcaaagacttctgggacatcctgaatgagggtaatgaggacagcatcaac
aggttaacggacccggcggaagtgcacagggtttgcatcaacacaaactttgcagctcgg
ggtagatctggagaagaggagagaaagagtctctggaagacgaatgagaagttcctgtgg
aagaaataa

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