Cyclopterus lumpus (lumpfish): 117736423
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Entry
117736423 CDS
T09199
Symbol
pbx3b
Name
(RefSeq) pre-B-cell leukemia transcription factor 3b isoform X1
KO
K15610
pre-B-cell leukemia transcription factor 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117736423 (pbx3b)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117736423 (pbx3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
LZ3wCH
UCH
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
117736423
NCBI-ProteinID:
XP_034397641
Ensembl:
ENSCLMG00005018664
LinkDB
All DBs
Position
9:complement(11538517..11593269)
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AA seq
433 aa
AA seq
DB search
MDDQARIMQSIGGVSLAGHSVQGGMALPPPHGHDGTDGDGRKQDIGDILHQIMTITDQSL
DEAQAKKHGLNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVA
GPEKGGGSAAAAAAAAAAGGAADNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHV
MNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRN
FSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQ
EEANLYAAKTAVNAAHAAAAAVQNSQANSPTTPNSGSSGSFNLPNSGDMFLSMQSLNGDS
YQGAQVGANVQSQVDTLRHVISQTAGYSDALGGNTMYSPYGLTANGGWQDATTPSSVICS
TEGPGSVHSDTSN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcaagcccggatcatgcagtccatcggcggtgtcagtctggccggccactcg
gtacaaggaggcatggcattgccgcctccacatggacacgatgggacagacggagacgga
agaaaacaagacattggtgacattctccatcaaataatgaccataactgatcaaagtctg
gacgaggcgcaagcaaagaaacatggactgaactgtcacagaatgaaaccagcactcttc
agcgttctctgtgaaatcaaagaaaagacaggtctcagcatccgtggtgcccaggaggag
gaccccccagacccccagctcatgcgtttggacaacatgctgctggcagagggcgtggca
ggaccagagaaaggtggcggatctgccgccgccgcagctgcagccgcggccgccggaggg
gcagccgacaactccattgaacattccgactacagagccaaactcacccagatcagacag
atctaccacacggagctggagaaatacgaacaggcatgcaacgaattcactacccatgtg
atgaacctgctgagggaacagtctcgcacgcggcccatctcccccaaagagattgagcgc
atggtgggaatcatccaccgtaaattcagctccatccagatgcaactgaaacagagcacc
tgtgaggctgtcatgatcctgcgctccagattccttgatgccaggcggaaaaggagaaac
ttcagcaagcaggcgacggaaattttgaacgaatacttctactcgcacctcagcaaccca
tatccaagtgaggaggctaaagaggagctggcgaagaagtgcagcatcacagtttcccag
gtatccaactggtttggcaacaaaaggatccggtacaagaaaaatatcggcaagtttcag
gaagaagccaacctgtatgccgccaagactgctgtaaatgcagcacacgctgcagccgct
gcagtgcagaacagccaggccaactcccctaccacacctaactctggttcttcaggttct
tttaacctcccaaactctggggacatgttcttgagcatgcagagtctgaatggggactct
taccaaggggcacaagtcggagccaatgtacagtcacaggtggatactctgcgccatgtt
atcagtcagacggcaggatacagtgatgcgcttggggggaacacaatgtatagtccatat
gggttaactgctaatgggggatggcaagatgcaacgactccgtcttctgtaatatgttcg
acagaaggacccggaagtgtgcactccgatacctcaaattga
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